Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17770 | 53533;53534;53535 | chr2:178607294;178607293;178607292 | chr2:179472021;179472020;179472019 |
N2AB | 16129 | 48610;48611;48612 | chr2:178607294;178607293;178607292 | chr2:179472021;179472020;179472019 |
N2A | 15202 | 45829;45830;45831 | chr2:178607294;178607293;178607292 | chr2:179472021;179472020;179472019 |
N2B | 8705 | 26338;26339;26340 | chr2:178607294;178607293;178607292 | chr2:179472021;179472020;179472019 |
Novex-1 | 8830 | 26713;26714;26715 | chr2:178607294;178607293;178607292 | chr2:179472021;179472020;179472019 |
Novex-2 | 8897 | 26914;26915;26916 | chr2:178607294;178607293;178607292 | chr2:179472021;179472020;179472019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.627 | 0.284 | 0.283761946502 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5464 | ambiguous | 0.495 | ambiguous | -0.247 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.515361139 | None | None | N |
D/C | 0.8837 | likely_pathogenic | 0.8761 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
D/E | 0.4267 | ambiguous | 0.3885 | ambiguous | -0.332 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.48923333 | None | None | N |
D/F | 0.8885 | likely_pathogenic | 0.8562 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
D/G | 0.4261 | ambiguous | 0.4171 | ambiguous | -0.464 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.50808845 | None | None | N |
D/H | 0.7151 | likely_pathogenic | 0.6611 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.801 | deleterious | N | 0.479304822 | None | None | N |
D/I | 0.9082 | likely_pathogenic | 0.8597 | pathogenic | 0.281 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
D/K | 0.8686 | likely_pathogenic | 0.8438 | pathogenic | 0.257 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
D/L | 0.801 | likely_pathogenic | 0.7625 | pathogenic | 0.281 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
D/M | 0.9323 | likely_pathogenic | 0.9097 | pathogenic | 0.293 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/N | 0.2491 | likely_benign | 0.2101 | benign | -0.166 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.47910955 | None | None | N |
D/P | 0.9697 | likely_pathogenic | 0.9585 | pathogenic | 0.127 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
D/Q | 0.7649 | likely_pathogenic | 0.7133 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
D/R | 0.8717 | likely_pathogenic | 0.8406 | pathogenic | 0.506 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
D/S | 0.4184 | ambiguous | 0.3617 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
D/T | 0.7714 | likely_pathogenic | 0.7249 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/V | 0.7787 | likely_pathogenic | 0.6923 | pathogenic | 0.127 | Stabilizing | 1.0 | D | 0.841 | deleterious | N | 0.479558311 | None | None | N |
D/W | 0.9797 | likely_pathogenic | 0.9746 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
D/Y | 0.5738 | likely_pathogenic | 0.5116 | ambiguous | 0.194 | Stabilizing | 1.0 | D | 0.848 | deleterious | N | 0.497916056 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.