Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17783 | 53572;53573;53574 | chr2:178607255;178607254;178607253 | chr2:179471982;179471981;179471980 |
N2AB | 16142 | 48649;48650;48651 | chr2:178607255;178607254;178607253 | chr2:179471982;179471981;179471980 |
N2A | 15215 | 45868;45869;45870 | chr2:178607255;178607254;178607253 | chr2:179471982;179471981;179471980 |
N2B | 8718 | 26377;26378;26379 | chr2:178607255;178607254;178607253 | chr2:179471982;179471981;179471980 |
Novex-1 | 8843 | 26752;26753;26754 | chr2:178607255;178607254;178607253 | chr2:179471982;179471981;179471980 |
Novex-2 | 8910 | 26953;26954;26955 | chr2:178607255;178607254;178607253 | chr2:179471982;179471981;179471980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs777712545 | -1.89 | 1.0 | D | 0.879 | 0.821 | 0.779797818376 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9868 | likely_pathogenic | 0.9879 | pathogenic | -2.712 | Highly Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/C | 0.9765 | likely_pathogenic | 0.9767 | pathogenic | -1.787 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -3.472 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/E | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -3.158 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/F | 0.8288 | likely_pathogenic | 0.8781 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.523849849 | None | None | N |
L/G | 0.9974 | likely_pathogenic | 0.9979 | pathogenic | -3.274 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/H | 0.9966 | likely_pathogenic | 0.9975 | pathogenic | -3.078 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.543221552 | None | None | N |
L/I | 0.2486 | likely_benign | 0.2503 | benign | -0.996 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.479190961 | None | None | N |
L/K | 0.9966 | likely_pathogenic | 0.9971 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/M | 0.5269 | ambiguous | 0.5777 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/N | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.969 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/P | 0.9976 | likely_pathogenic | 0.9979 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.543221552 | None | None | N |
L/Q | 0.9933 | likely_pathogenic | 0.9952 | pathogenic | -2.572 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/R | 0.9934 | likely_pathogenic | 0.9946 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.543221552 | None | None | N |
L/S | 0.9986 | likely_pathogenic | 0.9988 | pathogenic | -3.372 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/T | 0.9917 | likely_pathogenic | 0.992 | pathogenic | -2.901 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
L/V | 0.4165 | ambiguous | 0.3951 | ambiguous | -1.563 | Destabilizing | 0.999 | D | 0.588 | neutral | N | 0.501496125 | None | None | N |
L/W | 0.9855 | likely_pathogenic | 0.9893 | pathogenic | -2.051 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/Y | 0.9907 | likely_pathogenic | 0.9928 | pathogenic | -1.92 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.