Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17795 | 53608;53609;53610 | chr2:178607219;178607218;178607217 | chr2:179471946;179471945;179471944 |
N2AB | 16154 | 48685;48686;48687 | chr2:178607219;178607218;178607217 | chr2:179471946;179471945;179471944 |
N2A | 15227 | 45904;45905;45906 | chr2:178607219;178607218;178607217 | chr2:179471946;179471945;179471944 |
N2B | 8730 | 26413;26414;26415 | chr2:178607219;178607218;178607217 | chr2:179471946;179471945;179471944 |
Novex-1 | 8855 | 26788;26789;26790 | chr2:178607219;178607218;178607217 | chr2:179471946;179471945;179471944 |
Novex-2 | 8922 | 26989;26990;26991 | chr2:178607219;178607218;178607217 | chr2:179471946;179471945;179471944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1447853975 | None | None | N | 0.149 | 0.072 | 0.0611884634855 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1447853975 | None | None | N | 0.149 | 0.072 | 0.0611884634855 | gnomAD-4.0.0 | 6.57825E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47154E-05 | 0 | 0 |
E/K | None | None | 0.22 | N | 0.579 | 0.246 | 0.243972157842 | gnomAD-4.0.0 | 6.16065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19831E-06 | 0 | 1.65777E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2674 | likely_benign | 0.2596 | benign | -0.355 | Destabilizing | 0.22 | N | 0.632 | neutral | N | 0.455702334 | None | None | I |
E/C | 0.8634 | likely_pathogenic | 0.8833 | pathogenic | 0.057 | Stabilizing | 0.968 | D | 0.75 | deleterious | None | None | None | None | I |
E/D | 0.0772 | likely_benign | 0.0894 | benign | -0.263 | Destabilizing | None | N | 0.149 | neutral | N | 0.419088172 | None | None | I |
E/F | 0.8529 | likely_pathogenic | 0.8682 | pathogenic | -0.273 | Destabilizing | 0.89 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/G | 0.3131 | likely_benign | 0.3072 | benign | -0.54 | Destabilizing | 0.22 | N | 0.625 | neutral | N | 0.48592924 | None | None | I |
E/H | 0.6732 | likely_pathogenic | 0.6768 | pathogenic | -0.055 | Destabilizing | 0.726 | D | 0.544 | neutral | None | None | None | None | I |
E/I | 0.5713 | likely_pathogenic | 0.5514 | ambiguous | 0.095 | Stabilizing | 0.726 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/K | 0.422 | ambiguous | 0.3658 | ambiguous | 0.435 | Stabilizing | 0.22 | N | 0.579 | neutral | N | 0.44548534 | None | None | I |
E/L | 0.5866 | likely_pathogenic | 0.5905 | pathogenic | 0.095 | Stabilizing | 0.567 | D | 0.674 | neutral | None | None | None | None | I |
E/M | 0.7098 | likely_pathogenic | 0.6815 | pathogenic | 0.23 | Stabilizing | 0.968 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/N | 0.2978 | likely_benign | 0.3021 | benign | 0.099 | Stabilizing | 0.157 | N | 0.556 | neutral | None | None | None | None | I |
E/P | 0.3811 | ambiguous | 0.47 | ambiguous | -0.035 | Destabilizing | 0.726 | D | 0.582 | neutral | None | None | None | None | I |
E/Q | 0.3255 | likely_benign | 0.295 | benign | 0.141 | Stabilizing | 0.22 | N | 0.508 | neutral | N | 0.459916075 | None | None | I |
E/R | 0.5463 | ambiguous | 0.5211 | ambiguous | 0.576 | Stabilizing | 0.567 | D | 0.551 | neutral | None | None | None | None | I |
E/S | 0.306 | likely_benign | 0.3008 | benign | -0.044 | Destabilizing | 0.157 | N | 0.567 | neutral | None | None | None | None | I |
E/T | 0.4029 | ambiguous | 0.3813 | ambiguous | 0.113 | Stabilizing | 0.272 | N | 0.594 | neutral | None | None | None | None | I |
E/V | 0.3815 | ambiguous | 0.3485 | ambiguous | -0.035 | Destabilizing | 0.667 | D | 0.617 | neutral | N | 0.489718907 | None | None | I |
E/W | 0.9459 | likely_pathogenic | 0.9543 | pathogenic | -0.134 | Destabilizing | 0.968 | D | 0.767 | deleterious | None | None | None | None | I |
E/Y | 0.7242 | likely_pathogenic | 0.7528 | pathogenic | -0.031 | Destabilizing | 0.89 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.