Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17798 | 53617;53618;53619 | chr2:178607210;178607209;178607208 | chr2:179471937;179471936;179471935 |
N2AB | 16157 | 48694;48695;48696 | chr2:178607210;178607209;178607208 | chr2:179471937;179471936;179471935 |
N2A | 15230 | 45913;45914;45915 | chr2:178607210;178607209;178607208 | chr2:179471937;179471936;179471935 |
N2B | 8733 | 26422;26423;26424 | chr2:178607210;178607209;178607208 | chr2:179471937;179471936;179471935 |
Novex-1 | 8858 | 26797;26798;26799 | chr2:178607210;178607209;178607208 | chr2:179471937;179471936;179471935 |
Novex-2 | 8925 | 26998;26999;27000 | chr2:178607210;178607209;178607208 | chr2:179471937;179471936;179471935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 1.0 | N | 0.583 | 0.454 | 0.412980791724 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4176 | ambiguous | 0.3232 | benign | -0.766 | Destabilizing | 1.0 | D | 0.583 | neutral | N | 0.478693527 | None | None | N |
G/C | 0.6538 | likely_pathogenic | 0.5671 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.504497238 | None | None | N |
G/D | 0.9079 | likely_pathogenic | 0.784 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.489151233 | None | None | N |
G/E | 0.9346 | likely_pathogenic | 0.8094 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
G/F | 0.9821 | likely_pathogenic | 0.9595 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
G/H | 0.9139 | likely_pathogenic | 0.8561 | pathogenic | -1.508 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/I | 0.9788 | likely_pathogenic | 0.9392 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
G/K | 0.9718 | likely_pathogenic | 0.9281 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
G/L | 0.9733 | likely_pathogenic | 0.9423 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
G/M | 0.9699 | likely_pathogenic | 0.9319 | pathogenic | -0.294 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
G/N | 0.8386 | likely_pathogenic | 0.7534 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
G/P | 0.9991 | likely_pathogenic | 0.9982 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
G/Q | 0.9142 | likely_pathogenic | 0.8253 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
G/R | 0.9324 | likely_pathogenic | 0.847 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.485579608 | None | None | N |
G/S | 0.3354 | likely_benign | 0.2545 | benign | -1.359 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.51992717 | None | None | N |
G/T | 0.7836 | likely_pathogenic | 0.6307 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
G/V | 0.9404 | likely_pathogenic | 0.8502 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.521334045 | None | None | N |
G/W | 0.9622 | likely_pathogenic | 0.9223 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
G/Y | 0.9457 | likely_pathogenic | 0.9017 | pathogenic | -0.88 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.