Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17805 | 53638;53639;53640 | chr2:178607189;178607188;178607187 | chr2:179471916;179471915;179471914 |
N2AB | 16164 | 48715;48716;48717 | chr2:178607189;178607188;178607187 | chr2:179471916;179471915;179471914 |
N2A | 15237 | 45934;45935;45936 | chr2:178607189;178607188;178607187 | chr2:179471916;179471915;179471914 |
N2B | 8740 | 26443;26444;26445 | chr2:178607189;178607188;178607187 | chr2:179471916;179471915;179471914 |
Novex-1 | 8865 | 26818;26819;26820 | chr2:178607189;178607188;178607187 | chr2:179471916;179471915;179471914 |
Novex-2 | 8932 | 27019;27020;27021 | chr2:178607189;178607188;178607187 | chr2:179471916;179471915;179471914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1051218836 | -0.056 | 0.999 | N | 0.813 | 0.427 | 0.75224819921 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/Y | rs1051218836 | -0.056 | 0.999 | N | 0.813 | 0.427 | 0.75224819921 | gnomAD-4.0.0 | 2.05351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73671E-04 | 0 | 0 | 3.31554E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9651 | likely_pathogenic | 0.9569 | pathogenic | -0.73 | Destabilizing | 0.865 | D | 0.626 | neutral | N | 0.471595821 | None | None | N |
D/C | 0.9894 | likely_pathogenic | 0.9872 | pathogenic | -0.475 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
D/E | 0.8149 | likely_pathogenic | 0.7968 | pathogenic | -0.794 | Destabilizing | 0.039 | N | 0.229 | neutral | N | 0.457640987 | None | None | N |
D/F | 0.9933 | likely_pathogenic | 0.9938 | pathogenic | -0.317 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
D/G | 0.9655 | likely_pathogenic | 0.9606 | pathogenic | -1.089 | Destabilizing | 0.928 | D | 0.615 | neutral | N | 0.482649411 | None | None | N |
D/H | 0.9804 | likely_pathogenic | 0.9789 | pathogenic | -0.735 | Destabilizing | 0.997 | D | 0.778 | deleterious | N | 0.496639063 | None | None | N |
D/I | 0.9897 | likely_pathogenic | 0.9899 | pathogenic | 0.228 | Stabilizing | 0.992 | D | 0.828 | deleterious | None | None | None | None | N |
D/K | 0.9923 | likely_pathogenic | 0.9921 | pathogenic | -0.95 | Destabilizing | 0.968 | D | 0.671 | neutral | None | None | None | None | N |
D/L | 0.9808 | likely_pathogenic | 0.9811 | pathogenic | 0.228 | Stabilizing | 0.983 | D | 0.81 | deleterious | None | None | None | None | N |
D/M | 0.9935 | likely_pathogenic | 0.9936 | pathogenic | 0.718 | Stabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
D/N | 0.8656 | likely_pathogenic | 0.8346 | pathogenic | -1.25 | Destabilizing | 0.978 | D | 0.671 | neutral | N | 0.484268799 | None | None | N |
D/P | 0.9948 | likely_pathogenic | 0.9929 | pathogenic | -0.067 | Destabilizing | 0.992 | D | 0.787 | deleterious | None | None | None | None | N |
D/Q | 0.9868 | likely_pathogenic | 0.9864 | pathogenic | -1.095 | Destabilizing | 0.968 | D | 0.761 | deleterious | None | None | None | None | N |
D/R | 0.9925 | likely_pathogenic | 0.9928 | pathogenic | -0.726 | Destabilizing | 0.983 | D | 0.799 | deleterious | None | None | None | None | N |
D/S | 0.9556 | likely_pathogenic | 0.9447 | pathogenic | -1.559 | Destabilizing | 0.895 | D | 0.568 | neutral | None | None | None | None | N |
D/T | 0.9816 | likely_pathogenic | 0.9789 | pathogenic | -1.276 | Destabilizing | 0.983 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/V | 0.9691 | likely_pathogenic | 0.9671 | pathogenic | -0.067 | Destabilizing | 0.978 | D | 0.808 | deleterious | N | 0.491866123 | None | None | N |
D/W | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -0.181 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
D/Y | 0.9603 | likely_pathogenic | 0.9585 | pathogenic | -0.133 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.515757276 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.