Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17809 | 53650;53651;53652 | chr2:178607177;178607176;178607175 | chr2:179471904;179471903;179471902 |
N2AB | 16168 | 48727;48728;48729 | chr2:178607177;178607176;178607175 | chr2:179471904;179471903;179471902 |
N2A | 15241 | 45946;45947;45948 | chr2:178607177;178607176;178607175 | chr2:179471904;179471903;179471902 |
N2B | 8744 | 26455;26456;26457 | chr2:178607177;178607176;178607175 | chr2:179471904;179471903;179471902 |
Novex-1 | 8869 | 26830;26831;26832 | chr2:178607177;178607176;178607175 | chr2:179471904;179471903;179471902 |
Novex-2 | 8936 | 27031;27032;27033 | chr2:178607177;178607176;178607175 | chr2:179471904;179471903;179471902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.961 | N | 0.481 | 0.424 | 0.232513804876 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.592 | likely_pathogenic | 0.5625 | ambiguous | 0.567 | Stabilizing | 0.985 | D | 0.47 | neutral | None | None | None | None | N |
H/C | 0.4404 | ambiguous | 0.4432 | ambiguous | 0.669 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
H/D | 0.5959 | likely_pathogenic | 0.5723 | pathogenic | -0.1 | Destabilizing | 0.997 | D | 0.489 | neutral | N | 0.423741844 | None | None | N |
H/E | 0.7077 | likely_pathogenic | 0.69 | pathogenic | -0.109 | Destabilizing | 0.985 | D | 0.463 | neutral | None | None | None | None | N |
H/F | 0.4898 | ambiguous | 0.4944 | ambiguous | 0.923 | Stabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
H/G | 0.5891 | likely_pathogenic | 0.5568 | ambiguous | 0.383 | Stabilizing | 0.993 | D | 0.474 | neutral | None | None | None | None | N |
H/I | 0.6822 | likely_pathogenic | 0.6594 | pathogenic | 1.004 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
H/K | 0.5397 | ambiguous | 0.4868 | ambiguous | 0.561 | Stabilizing | 0.469 | N | 0.385 | neutral | None | None | None | None | N |
H/L | 0.3105 | likely_benign | 0.3046 | benign | 1.004 | Stabilizing | 0.997 | D | 0.536 | neutral | N | 0.453197959 | None | None | N |
H/M | 0.6095 | likely_pathogenic | 0.6037 | pathogenic | 0.672 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
H/N | 0.239 | likely_benign | 0.2205 | benign | 0.472 | Stabilizing | 0.99 | D | 0.495 | neutral | N | 0.435476203 | None | None | N |
H/P | 0.4002 | ambiguous | 0.3579 | ambiguous | 0.881 | Stabilizing | 0.999 | D | 0.598 | neutral | N | 0.445135836 | None | None | N |
H/Q | 0.4348 | ambiguous | 0.3982 | ambiguous | 0.489 | Stabilizing | 0.994 | D | 0.507 | neutral | N | 0.447944068 | None | None | N |
H/R | 0.3549 | ambiguous | 0.2991 | benign | 0.153 | Stabilizing | 0.961 | D | 0.481 | neutral | N | 0.432534685 | None | None | N |
H/S | 0.5179 | ambiguous | 0.4898 | ambiguous | 0.577 | Stabilizing | 0.985 | D | 0.513 | neutral | None | None | None | None | N |
H/T | 0.6246 | likely_pathogenic | 0.6028 | pathogenic | 0.652 | Stabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | N |
H/V | 0.5659 | likely_pathogenic | 0.5384 | ambiguous | 0.881 | Stabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
H/W | 0.635 | likely_pathogenic | 0.6309 | pathogenic | 0.757 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
H/Y | 0.2335 | likely_benign | 0.2215 | benign | 1.06 | Stabilizing | 0.997 | D | 0.467 | neutral | N | 0.490985556 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.