Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17815 | 53668;53669;53670 | chr2:178607159;178607158;178607157 | chr2:179471886;179471885;179471884 |
N2AB | 16174 | 48745;48746;48747 | chr2:178607159;178607158;178607157 | chr2:179471886;179471885;179471884 |
N2A | 15247 | 45964;45965;45966 | chr2:178607159;178607158;178607157 | chr2:179471886;179471885;179471884 |
N2B | 8750 | 26473;26474;26475 | chr2:178607159;178607158;178607157 | chr2:179471886;179471885;179471884 |
Novex-1 | 8875 | 26848;26849;26850 | chr2:178607159;178607158;178607157 | chr2:179471886;179471885;179471884 |
Novex-2 | 8942 | 27049;27050;27051 | chr2:178607159;178607158;178607157 | chr2:179471886;179471885;179471884 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs370843257 | -0.74 | 0.966 | N | 0.541 | 0.204 | None | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 1.65893E-04 |
I/M | rs370843257 | -0.74 | 0.966 | N | 0.541 | 0.204 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs370843257 | -0.74 | 0.966 | N | 0.541 | 0.204 | None | gnomAD-4.0.0 | 3.71992E-06 | None | None | None | None | N | None | 0 | 1.66795E-05 | None | 0 | 0 | None | 0 | 0 | 2.54386E-06 | 0 | 3.20431E-05 |
I/T | rs374563054 | -1.764 | 0.801 | N | 0.465 | 0.318 | None | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 2.48242E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs374563054 | -1.764 | 0.801 | N | 0.465 | 0.318 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 1.93153E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs374563054 | -1.764 | 0.801 | N | 0.465 | 0.318 | None | gnomAD-4.0.0 | 1.61189E-05 | None | None | None | None | N | None | 2.93529E-04 | 1.66728E-05 | None | 0 | 0 | None | 0 | 0 | 2.54392E-06 | 0 | 0 |
I/V | rs368065637 | -1.128 | 0.005 | N | 0.147 | 0.086 | None | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 3.27E-05 | None | 0 | 3.56E-05 | 0 |
I/V | rs368065637 | -1.128 | 0.005 | N | 0.147 | 0.086 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs368065637 | -1.128 | 0.005 | N | 0.147 | 0.086 | None | gnomAD-4.0.0 | 3.71993E-05 | None | None | None | None | N | None | 5.34359E-05 | 0 | None | 0 | 0 | None | 0 | 1.6469E-04 | 4.15504E-05 | 3.29468E-05 | 4.80677E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4585 | ambiguous | 0.518 | ambiguous | -1.593 | Destabilizing | 0.525 | D | 0.478 | neutral | None | None | None | None | N |
I/C | 0.8587 | likely_pathogenic | 0.894 | pathogenic | -0.863 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
I/D | 0.9486 | likely_pathogenic | 0.9587 | pathogenic | -1.2 | Destabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
I/E | 0.8322 | likely_pathogenic | 0.8494 | pathogenic | -1.184 | Destabilizing | 0.974 | D | 0.595 | neutral | None | None | None | None | N |
I/F | 0.379 | ambiguous | 0.3876 | ambiguous | -1.058 | Destabilizing | 0.016 | N | 0.33 | neutral | None | None | None | None | N |
I/G | 0.877 | likely_pathogenic | 0.8999 | pathogenic | -1.928 | Destabilizing | 0.974 | D | 0.589 | neutral | None | None | None | None | N |
I/H | 0.8768 | likely_pathogenic | 0.8869 | pathogenic | -1.213 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
I/K | 0.7784 | likely_pathogenic | 0.7899 | pathogenic | -1.222 | Destabilizing | 0.966 | D | 0.598 | neutral | N | 0.464743104 | None | None | N |
I/L | 0.1566 | likely_benign | 0.1709 | benign | -0.74 | Destabilizing | 0.267 | N | 0.339 | neutral | N | 0.40802303 | None | None | N |
I/M | 0.1356 | likely_benign | 0.1431 | benign | -0.521 | Destabilizing | 0.966 | D | 0.541 | neutral | N | 0.440636881 | None | None | N |
I/N | 0.7315 | likely_pathogenic | 0.7499 | pathogenic | -1.053 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
I/P | 0.9661 | likely_pathogenic | 0.9712 | pathogenic | -0.993 | Destabilizing | 0.991 | D | 0.618 | neutral | None | None | None | None | N |
I/Q | 0.7385 | likely_pathogenic | 0.7499 | pathogenic | -1.197 | Destabilizing | 0.991 | D | 0.609 | neutral | None | None | None | None | N |
I/R | 0.7223 | likely_pathogenic | 0.7297 | pathogenic | -0.64 | Destabilizing | 0.966 | D | 0.623 | neutral | N | 0.473727947 | None | None | N |
I/S | 0.5993 | likely_pathogenic | 0.6274 | pathogenic | -1.614 | Destabilizing | 0.915 | D | 0.557 | neutral | None | None | None | None | N |
I/T | 0.324 | likely_benign | 0.3677 | ambiguous | -1.485 | Destabilizing | 0.801 | D | 0.465 | neutral | N | 0.410583333 | None | None | N |
I/V | 0.0837 | likely_benign | 0.0912 | benign | -0.993 | Destabilizing | 0.005 | N | 0.147 | neutral | N | 0.417354589 | None | None | N |
I/W | 0.9168 | likely_pathogenic | 0.9211 | pathogenic | -1.197 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
I/Y | 0.8116 | likely_pathogenic | 0.8097 | pathogenic | -0.966 | Destabilizing | 0.904 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.