Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17816 | 53671;53672;53673 | chr2:178607156;178607155;178607154 | chr2:179471883;179471882;179471881 |
N2AB | 16175 | 48748;48749;48750 | chr2:178607156;178607155;178607154 | chr2:179471883;179471882;179471881 |
N2A | 15248 | 45967;45968;45969 | chr2:178607156;178607155;178607154 | chr2:179471883;179471882;179471881 |
N2B | 8751 | 26476;26477;26478 | chr2:178607156;178607155;178607154 | chr2:179471883;179471882;179471881 |
Novex-1 | 8876 | 26851;26852;26853 | chr2:178607156;178607155;178607154 | chr2:179471883;179471882;179471881 |
Novex-2 | 8943 | 27052;27053;27054 | chr2:178607156;178607155;178607154 | chr2:179471883;179471882;179471881 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.645 | N | 0.603 | 0.356 | 0.402043589563 | gnomAD-4.0.0 | 2.05356E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69941E-06 | 0 | 0 |
E/V | None | None | 0.928 | N | 0.706 | 0.487 | 0.587119504466 | gnomAD-4.0.0 | 6.84519E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16007E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3107 | likely_benign | 0.3585 | ambiguous | -0.543 | Destabilizing | 0.645 | D | 0.634 | neutral | N | 0.468481949 | None | None | N |
E/C | 0.8939 | likely_pathogenic | 0.9263 | pathogenic | -0.231 | Destabilizing | 0.995 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/D | 0.1933 | likely_benign | 0.1772 | benign | -0.572 | Destabilizing | 0.002 | N | 0.221 | neutral | N | 0.479845843 | None | None | N |
E/F | 0.8184 | likely_pathogenic | 0.8462 | pathogenic | -0.1 | Destabilizing | 0.995 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/G | 0.4841 | ambiguous | 0.5219 | ambiguous | -0.816 | Destabilizing | 0.645 | D | 0.603 | neutral | N | 0.480598723 | None | None | N |
E/H | 0.7004 | likely_pathogenic | 0.739 | pathogenic | 0.017 | Stabilizing | 0.995 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/I | 0.4798 | ambiguous | 0.517 | ambiguous | 0.17 | Stabilizing | 0.945 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/K | 0.47 | ambiguous | 0.5027 | ambiguous | 0.129 | Stabilizing | 0.645 | D | 0.585 | neutral | N | 0.50175991 | None | None | N |
E/L | 0.5589 | ambiguous | 0.6156 | pathogenic | 0.17 | Stabilizing | 0.945 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/M | 0.6164 | likely_pathogenic | 0.6599 | pathogenic | 0.299 | Stabilizing | 0.995 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/N | 0.4587 | ambiguous | 0.4687 | ambiguous | -0.427 | Destabilizing | 0.809 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/P | 0.7407 | likely_pathogenic | 0.7931 | pathogenic | -0.047 | Destabilizing | 0.945 | D | 0.75 | deleterious | None | None | None | None | N |
E/Q | 0.3011 | likely_benign | 0.3385 | benign | -0.337 | Destabilizing | 0.864 | D | 0.663 | neutral | N | 0.481457642 | None | None | N |
E/R | 0.6127 | likely_pathogenic | 0.6576 | pathogenic | 0.42 | Stabilizing | 0.945 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/S | 0.3853 | ambiguous | 0.4296 | ambiguous | -0.595 | Destabilizing | 0.547 | D | 0.595 | neutral | None | None | None | None | N |
E/T | 0.3585 | ambiguous | 0.3945 | ambiguous | -0.363 | Destabilizing | 0.894 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/V | 0.2921 | likely_benign | 0.3153 | benign | -0.047 | Destabilizing | 0.928 | D | 0.706 | prob.neutral | N | 0.485180625 | None | None | N |
E/W | 0.9458 | likely_pathogenic | 0.9541 | pathogenic | 0.159 | Stabilizing | 0.995 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Y | 0.7479 | likely_pathogenic | 0.7829 | pathogenic | 0.17 | Stabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.