Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17818 | 53677;53678;53679 | chr2:178607150;178607149;178607148 | chr2:179471877;179471876;179471875 |
N2AB | 16177 | 48754;48755;48756 | chr2:178607150;178607149;178607148 | chr2:179471877;179471876;179471875 |
N2A | 15250 | 45973;45974;45975 | chr2:178607150;178607149;178607148 | chr2:179471877;179471876;179471875 |
N2B | 8753 | 26482;26483;26484 | chr2:178607150;178607149;178607148 | chr2:179471877;179471876;179471875 |
Novex-1 | 8878 | 26857;26858;26859 | chr2:178607150;178607149;178607148 | chr2:179471877;179471876;179471875 |
Novex-2 | 8945 | 27058;27059;27060 | chr2:178607150;178607149;178607148 | chr2:179471877;179471876;179471875 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1055155891 | None | 0.001 | N | 0.134 | 0.059 | 0.0297737177859 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1055155891 | None | 0.001 | N | 0.134 | 0.059 | 0.0297737177859 | gnomAD-4.0.0 | 6.57964E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47184E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1715 | likely_benign | 0.2051 | benign | -0.26 | Destabilizing | 0.003 | N | 0.165 | neutral | N | 0.384204808 | None | None | N |
E/C | 0.8272 | likely_pathogenic | 0.897 | pathogenic | -0.048 | Destabilizing | 0.981 | D | 0.287 | neutral | None | None | None | None | N |
E/D | 0.1148 | likely_benign | 0.1315 | benign | -0.286 | Destabilizing | 0.001 | N | 0.134 | neutral | N | 0.385319529 | None | None | N |
E/F | 0.7968 | likely_pathogenic | 0.8281 | pathogenic | -0.121 | Destabilizing | 0.932 | D | 0.293 | neutral | None | None | None | None | N |
E/G | 0.1926 | likely_benign | 0.2159 | benign | -0.437 | Destabilizing | 0.165 | N | 0.304 | neutral | N | 0.474344022 | None | None | N |
E/H | 0.5691 | likely_pathogenic | 0.6491 | pathogenic | 0.226 | Stabilizing | 0.932 | D | 0.36 | neutral | None | None | None | None | N |
E/I | 0.4154 | ambiguous | 0.4604 | ambiguous | 0.165 | Stabilizing | 0.818 | D | 0.339 | neutral | None | None | None | None | N |
E/K | 0.2939 | likely_benign | 0.3122 | benign | 0.494 | Stabilizing | 0.324 | N | 0.262 | neutral | N | 0.397614035 | None | None | N |
E/L | 0.4469 | ambiguous | 0.5032 | ambiguous | 0.165 | Stabilizing | 0.388 | N | 0.373 | neutral | None | None | None | None | N |
E/M | 0.5307 | ambiguous | 0.5869 | pathogenic | 0.145 | Stabilizing | 0.981 | D | 0.287 | neutral | None | None | None | None | N |
E/N | 0.2656 | likely_benign | 0.3235 | benign | 0.096 | Stabilizing | 0.241 | N | 0.337 | neutral | None | None | None | None | N |
E/P | 0.3498 | ambiguous | 0.4325 | ambiguous | 0.043 | Stabilizing | 0.002 | N | 0.167 | neutral | None | None | None | None | N |
E/Q | 0.1953 | likely_benign | 0.2264 | benign | 0.136 | Stabilizing | 0.324 | N | 0.336 | neutral | N | 0.435441705 | None | None | N |
E/R | 0.4296 | ambiguous | 0.4824 | ambiguous | 0.689 | Stabilizing | 0.69 | D | 0.351 | neutral | None | None | None | None | N |
E/S | 0.1914 | likely_benign | 0.2347 | benign | -0.026 | Destabilizing | 0.116 | N | 0.273 | neutral | None | None | None | None | N |
E/T | 0.2304 | likely_benign | 0.2671 | benign | 0.128 | Stabilizing | 0.388 | N | 0.339 | neutral | None | None | None | None | N |
E/V | 0.2613 | likely_benign | 0.2809 | benign | 0.043 | Stabilizing | 0.324 | N | 0.322 | neutral | N | 0.434748271 | None | None | N |
E/W | 0.9182 | likely_pathogenic | 0.9413 | pathogenic | 0.027 | Stabilizing | 0.981 | D | 0.465 | neutral | None | None | None | None | N |
E/Y | 0.7062 | likely_pathogenic | 0.7611 | pathogenic | 0.13 | Stabilizing | 0.932 | D | 0.296 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.