Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1782 | 5569;5570;5571 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
N2AB | 1782 | 5569;5570;5571 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
N2A | 1782 | 5569;5570;5571 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
N2B | 1736 | 5431;5432;5433 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
Novex-1 | 1736 | 5431;5432;5433 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
Novex-2 | 1736 | 5431;5432;5433 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
Novex-3 | 1782 | 5569;5570;5571 | chr2:178776520;178776519;178776518 | chr2:179641247;179641246;179641245 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.998 | N | 0.458 | 0.323 | 0.293147016451 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8384 | likely_pathogenic | 0.8068 | pathogenic | -0.225 | Destabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | I |
K/C | 0.9688 | likely_pathogenic | 0.957 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/D | 0.955 | likely_pathogenic | 0.9511 | pathogenic | 0.049 | Stabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | I |
K/E | 0.8203 | likely_pathogenic | 0.7824 | pathogenic | 0.077 | Stabilizing | 0.996 | D | 0.433 | neutral | N | 0.400312547 | None | None | I |
K/F | 0.9886 | likely_pathogenic | 0.988 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
K/G | 0.9292 | likely_pathogenic | 0.9147 | pathogenic | -0.443 | Destabilizing | 0.997 | D | 0.446 | neutral | None | None | None | None | I |
K/H | 0.7461 | likely_pathogenic | 0.7201 | pathogenic | -0.696 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | I |
K/I | 0.8422 | likely_pathogenic | 0.8182 | pathogenic | 0.277 | Stabilizing | 1.0 | D | 0.643 | neutral | N | 0.48099163 | None | None | I |
K/L | 0.8596 | likely_pathogenic | 0.8409 | pathogenic | 0.277 | Stabilizing | 1.0 | D | 0.445 | neutral | None | None | None | None | I |
K/M | 0.8019 | likely_pathogenic | 0.7659 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | I |
K/N | 0.893 | likely_pathogenic | 0.8881 | pathogenic | -0.011 | Destabilizing | 0.884 | D | 0.392 | neutral | N | 0.497234809 | None | None | I |
K/P | 0.8912 | likely_pathogenic | 0.88 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.524 | neutral | None | None | None | None | I |
K/Q | 0.4941 | ambiguous | 0.4526 | ambiguous | -0.13 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.496721292 | None | None | I |
K/R | 0.1434 | likely_benign | 0.1341 | benign | -0.162 | Destabilizing | 0.998 | D | 0.458 | neutral | N | 0.463907528 | None | None | I |
K/S | 0.8951 | likely_pathogenic | 0.8798 | pathogenic | -0.517 | Destabilizing | 0.997 | D | 0.456 | neutral | None | None | None | None | I |
K/T | 0.6829 | likely_pathogenic | 0.6423 | pathogenic | -0.326 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.506645147 | None | None | I |
K/V | 0.8268 | likely_pathogenic | 0.8011 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | I |
K/W | 0.9866 | likely_pathogenic | 0.9826 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
K/Y | 0.9566 | likely_pathogenic | 0.9525 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.