Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17824 | 53695;53696;53697 | chr2:178607132;178607131;178607130 | chr2:179471859;179471858;179471857 |
N2AB | 16183 | 48772;48773;48774 | chr2:178607132;178607131;178607130 | chr2:179471859;179471858;179471857 |
N2A | 15256 | 45991;45992;45993 | chr2:178607132;178607131;178607130 | chr2:179471859;179471858;179471857 |
N2B | 8759 | 26500;26501;26502 | chr2:178607132;178607131;178607130 | chr2:179471859;179471858;179471857 |
Novex-1 | 8884 | 26875;26876;26877 | chr2:178607132;178607131;178607130 | chr2:179471859;179471858;179471857 |
Novex-2 | 8951 | 27076;27077;27078 | chr2:178607132;178607131;178607130 | chr2:179471859;179471858;179471857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs765709539 | -3.012 | 0.99 | N | 0.73 | 0.455 | 0.669809909516 | gnomAD-2.1.1 | 3.63E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.61986E-04 | None | 0 | 8.91E-06 | 0 |
I/T | rs765709539 | -3.012 | 0.99 | N | 0.73 | 0.455 | 0.669809909516 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
I/T | rs765709539 | -3.012 | 0.99 | N | 0.73 | 0.455 | 0.669809909516 | gnomAD-4.0.0 | 1.17809E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47968E-07 | 1.97824E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9625 | likely_pathogenic | 0.969 | pathogenic | -2.608 | Highly Destabilizing | 0.964 | D | 0.703 | prob.neutral | None | None | None | None | N |
I/C | 0.9461 | likely_pathogenic | 0.9497 | pathogenic | -1.862 | Destabilizing | 0.171 | N | 0.479 | neutral | None | None | None | None | N |
I/D | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -2.992 | Highly Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
I/E | 0.9951 | likely_pathogenic | 0.9956 | pathogenic | -2.753 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
I/F | 0.7571 | likely_pathogenic | 0.7539 | pathogenic | -1.623 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.471395238 | None | None | N |
I/G | 0.9964 | likely_pathogenic | 0.9967 | pathogenic | -3.176 | Highly Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
I/H | 0.9944 | likely_pathogenic | 0.9948 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
I/K | 0.993 | likely_pathogenic | 0.9932 | pathogenic | -2.065 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
I/L | 0.4278 | ambiguous | 0.446 | ambiguous | -0.958 | Destabilizing | 0.953 | D | 0.46 | neutral | N | 0.491905489 | None | None | N |
I/M | 0.4768 | ambiguous | 0.4773 | ambiguous | -0.831 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.477159364 | None | None | N |
I/N | 0.9794 | likely_pathogenic | 0.981 | pathogenic | -2.438 | Highly Destabilizing | 0.999 | D | 0.808 | deleterious | N | 0.507126903 | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9963 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
I/Q | 0.993 | likely_pathogenic | 0.9935 | pathogenic | -2.274 | Highly Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
I/R | 0.9899 | likely_pathogenic | 0.9906 | pathogenic | -1.811 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
I/S | 0.9782 | likely_pathogenic | 0.9808 | pathogenic | -3.13 | Highly Destabilizing | 0.997 | D | 0.753 | deleterious | N | 0.477159364 | None | None | N |
I/T | 0.9537 | likely_pathogenic | 0.9519 | pathogenic | -2.736 | Highly Destabilizing | 0.99 | D | 0.73 | prob.delet. | N | 0.480375368 | None | None | N |
I/V | 0.1316 | likely_benign | 0.1259 | benign | -1.49 | Destabilizing | 0.953 | D | 0.465 | neutral | N | 0.409636396 | None | None | N |
I/W | 0.9947 | likely_pathogenic | 0.9944 | pathogenic | -2.062 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
I/Y | 0.9753 | likely_pathogenic | 0.9772 | pathogenic | -1.76 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.