Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17828 | 53707;53708;53709 | chr2:178607120;178607119;178607118 | chr2:179471847;179471846;179471845 |
N2AB | 16187 | 48784;48785;48786 | chr2:178607120;178607119;178607118 | chr2:179471847;179471846;179471845 |
N2A | 15260 | 46003;46004;46005 | chr2:178607120;178607119;178607118 | chr2:179471847;179471846;179471845 |
N2B | 8763 | 26512;26513;26514 | chr2:178607120;178607119;178607118 | chr2:179471847;179471846;179471845 |
Novex-1 | 8888 | 26887;26888;26889 | chr2:178607120;178607119;178607118 | chr2:179471847;179471846;179471845 |
Novex-2 | 8955 | 27088;27089;27090 | chr2:178607120;178607119;178607118 | chr2:179471847;179471846;179471845 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | None | N | 0.12 | 0.044 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5258 | ambiguous | 0.4185 | ambiguous | -1.228 | Destabilizing | 0.035 | N | 0.352 | neutral | None | None | None | None | N |
L/C | 0.8031 | likely_pathogenic | 0.7322 | pathogenic | -0.82 | Destabilizing | 0.935 | D | 0.371 | neutral | None | None | None | None | N |
L/D | 0.9518 | likely_pathogenic | 0.9238 | pathogenic | -0.24 | Destabilizing | 0.555 | D | 0.461 | neutral | None | None | None | None | N |
L/E | 0.7986 | likely_pathogenic | 0.7075 | pathogenic | -0.246 | Destabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
L/F | 0.4617 | ambiguous | 0.3899 | ambiguous | -0.789 | Destabilizing | 0.317 | N | 0.323 | neutral | N | 0.481848785 | None | None | N |
L/G | 0.8505 | likely_pathogenic | 0.7796 | pathogenic | -1.514 | Destabilizing | 0.555 | D | 0.449 | neutral | None | None | None | None | N |
L/H | 0.7045 | likely_pathogenic | 0.6152 | pathogenic | -0.546 | Destabilizing | 0.915 | D | 0.465 | neutral | N | 0.49739424 | None | None | N |
L/I | 0.1258 | likely_benign | 0.0907 | benign | -0.538 | Destabilizing | None | N | 0.087 | neutral | N | 0.406446949 | None | None | N |
L/K | 0.678 | likely_pathogenic | 0.6116 | pathogenic | -0.663 | Destabilizing | 0.555 | D | 0.439 | neutral | None | None | None | None | N |
L/M | 0.1718 | likely_benign | 0.1296 | benign | -0.521 | Destabilizing | 0.007 | N | 0.267 | neutral | None | None | None | None | N |
L/N | 0.6923 | likely_pathogenic | 0.5692 | pathogenic | -0.546 | Destabilizing | 0.791 | D | 0.455 | neutral | None | None | None | None | N |
L/P | 0.8817 | likely_pathogenic | 0.8533 | pathogenic | -0.735 | Destabilizing | 0.741 | D | 0.457 | neutral | N | 0.503320135 | None | None | N |
L/Q | 0.4137 | ambiguous | 0.3427 | ambiguous | -0.685 | Destabilizing | 0.555 | D | 0.439 | neutral | None | None | None | None | N |
L/R | 0.6336 | likely_pathogenic | 0.5654 | pathogenic | -0.109 | Destabilizing | 0.484 | N | 0.445 | neutral | N | 0.471359645 | None | None | N |
L/S | 0.6719 | likely_pathogenic | 0.5736 | pathogenic | -1.198 | Destabilizing | 0.555 | D | 0.41 | neutral | None | None | None | None | N |
L/T | 0.4366 | ambiguous | 0.3328 | benign | -1.079 | Destabilizing | 0.149 | N | 0.39 | neutral | None | None | None | None | N |
L/V | 0.1406 | likely_benign | 0.1043 | benign | -0.735 | Destabilizing | None | N | 0.12 | neutral | N | 0.396056597 | None | None | N |
L/W | 0.7167 | likely_pathogenic | 0.6735 | pathogenic | -0.809 | Destabilizing | 0.935 | D | 0.521 | neutral | None | None | None | None | N |
L/Y | 0.7661 | likely_pathogenic | 0.7002 | pathogenic | -0.581 | Destabilizing | 0.555 | D | 0.358 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.