Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1783 | 5572;5573;5574 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
N2AB | 1783 | 5572;5573;5574 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
N2A | 1783 | 5572;5573;5574 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
N2B | 1737 | 5434;5435;5436 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
Novex-1 | 1737 | 5434;5435;5436 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
Novex-2 | 1737 | 5434;5435;5436 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
Novex-3 | 1783 | 5572;5573;5574 | chr2:178776517;178776516;178776515 | chr2:179641244;179641243;179641242 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.641 | 0.426 | 0.52891208781 | gnomAD-4.0.0 | 1.60245E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9375 | likely_pathogenic | 0.9285 | pathogenic | -0.434 | Destabilizing | 0.992 | D | 0.549 | neutral | None | None | None | None | I |
Y/C | 0.7865 | likely_pathogenic | 0.7392 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.641 | neutral | N | 0.500497634 | None | None | I |
Y/D | 0.9124 | likely_pathogenic | 0.8945 | pathogenic | 0.678 | Stabilizing | 0.999 | D | 0.621 | neutral | D | 0.541492705 | None | None | I |
Y/E | 0.9768 | likely_pathogenic | 0.971 | pathogenic | 0.647 | Stabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
Y/F | 0.1413 | likely_benign | 0.1443 | benign | -0.297 | Destabilizing | 0.121 | N | 0.354 | neutral | N | 0.486900949 | None | None | I |
Y/G | 0.9311 | likely_pathogenic | 0.9173 | pathogenic | -0.584 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | I |
Y/H | 0.6177 | likely_pathogenic | 0.5848 | pathogenic | 0.339 | Stabilizing | 0.999 | D | 0.586 | neutral | N | 0.459933374 | None | None | I |
Y/I | 0.9417 | likely_pathogenic | 0.9275 | pathogenic | -0.076 | Destabilizing | 0.995 | D | 0.565 | neutral | None | None | None | None | I |
Y/K | 0.9789 | likely_pathogenic | 0.9714 | pathogenic | 0.23 | Stabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
Y/L | 0.8917 | likely_pathogenic | 0.8785 | pathogenic | -0.076 | Destabilizing | 0.967 | D | 0.595 | neutral | None | None | None | None | I |
Y/M | 0.9466 | likely_pathogenic | 0.9273 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | I |
Y/N | 0.6606 | likely_pathogenic | 0.6185 | pathogenic | -0.031 | Destabilizing | 0.999 | D | 0.612 | neutral | N | 0.511387921 | None | None | I |
Y/P | 0.9962 | likely_pathogenic | 0.9958 | pathogenic | -0.176 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
Y/Q | 0.959 | likely_pathogenic | 0.9478 | pathogenic | 0.029 | Stabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
Y/R | 0.9544 | likely_pathogenic | 0.9393 | pathogenic | 0.417 | Stabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | I |
Y/S | 0.8493 | likely_pathogenic | 0.831 | pathogenic | -0.344 | Destabilizing | 0.999 | D | 0.595 | neutral | N | 0.503482246 | None | None | I |
Y/T | 0.9594 | likely_pathogenic | 0.9441 | pathogenic | -0.287 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
Y/V | 0.8893 | likely_pathogenic | 0.8697 | pathogenic | -0.176 | Destabilizing | 0.983 | D | 0.584 | neutral | None | None | None | None | I |
Y/W | 0.7198 | likely_pathogenic | 0.6933 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.