Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17840 | 53743;53744;53745 | chr2:178607084;178607083;178607082 | chr2:179471811;179471810;179471809 |
N2AB | 16199 | 48820;48821;48822 | chr2:178607084;178607083;178607082 | chr2:179471811;179471810;179471809 |
N2A | 15272 | 46039;46040;46041 | chr2:178607084;178607083;178607082 | chr2:179471811;179471810;179471809 |
N2B | 8775 | 26548;26549;26550 | chr2:178607084;178607083;178607082 | chr2:179471811;179471810;179471809 |
Novex-1 | 8900 | 26923;26924;26925 | chr2:178607084;178607083;178607082 | chr2:179471811;179471810;179471809 |
Novex-2 | 8967 | 27124;27125;27126 | chr2:178607084;178607083;178607082 | chr2:179471811;179471810;179471809 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs769761717 | -0.983 | 0.999 | N | 0.63 | 0.295 | 0.266385636622 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/N | rs769761717 | -0.983 | 0.999 | N | 0.63 | 0.295 | 0.266385636622 | gnomAD-4.0.0 | 6.84859E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9996E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8587 | likely_pathogenic | 0.7585 | pathogenic | -0.988 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | I |
K/C | 0.7651 | likely_pathogenic | 0.7511 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
K/D | 0.9829 | likely_pathogenic | 0.9674 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
K/E | 0.5554 | ambiguous | 0.3967 | ambiguous | -1.079 | Destabilizing | 0.996 | D | 0.433 | neutral | N | 0.382780656 | None | None | I |
K/F | 0.9703 | likely_pathogenic | 0.9574 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
K/G | 0.943 | likely_pathogenic | 0.8962 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/H | 0.7034 | likely_pathogenic | 0.6546 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/I | 0.7465 | likely_pathogenic | 0.614 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
K/L | 0.8269 | likely_pathogenic | 0.7321 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/M | 0.5928 | likely_pathogenic | 0.4559 | ambiguous | -0.057 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.49131363 | None | None | I |
K/N | 0.9386 | likely_pathogenic | 0.8735 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.63 | neutral | N | 0.491486989 | None | None | I |
K/P | 0.9963 | likely_pathogenic | 0.9947 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
K/Q | 0.2731 | likely_benign | 0.2074 | benign | -1.308 | Destabilizing | 0.999 | D | 0.626 | neutral | N | 0.466569901 | None | None | I |
K/R | 0.0915 | likely_benign | 0.0887 | benign | -1.03 | Destabilizing | 0.884 | D | 0.311 | neutral | N | 0.432033253 | None | None | I |
K/S | 0.9005 | likely_pathogenic | 0.8149 | pathogenic | -1.918 | Destabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | I |
K/T | 0.5583 | ambiguous | 0.391 | ambiguous | -1.513 | Destabilizing | 0.999 | D | 0.743 | deleterious | N | 0.481635354 | None | None | I |
K/V | 0.6007 | likely_pathogenic | 0.4838 | ambiguous | -0.224 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
K/W | 0.9395 | likely_pathogenic | 0.9313 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
K/Y | 0.9137 | likely_pathogenic | 0.8834 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.