Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17845 | 53758;53759;53760 | chr2:178607069;178607068;178607067 | chr2:179471796;179471795;179471794 |
N2AB | 16204 | 48835;48836;48837 | chr2:178607069;178607068;178607067 | chr2:179471796;179471795;179471794 |
N2A | 15277 | 46054;46055;46056 | chr2:178607069;178607068;178607067 | chr2:179471796;179471795;179471794 |
N2B | 8780 | 26563;26564;26565 | chr2:178607069;178607068;178607067 | chr2:179471796;179471795;179471794 |
Novex-1 | 8905 | 26938;26939;26940 | chr2:178607069;178607068;178607067 | chr2:179471796;179471795;179471794 |
Novex-2 | 8972 | 27139;27140;27141 | chr2:178607069;178607068;178607067 | chr2:179471796;179471795;179471794 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.975 | N | 0.585 | 0.254 | 0.468669884856 | gnomAD-4.0.0 | 1.5954E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3441 | ambiguous | 0.277 | benign | -1.287 | Destabilizing | 0.176 | N | 0.259 | neutral | None | None | None | None | N |
C/D | 0.6232 | likely_pathogenic | 0.5068 | ambiguous | -0.052 | Destabilizing | 0.003 | N | 0.495 | neutral | None | None | None | None | N |
C/E | 0.6875 | likely_pathogenic | 0.5788 | pathogenic | -0.008 | Destabilizing | 0.543 | D | 0.535 | neutral | None | None | None | None | N |
C/F | 0.2322 | likely_benign | 0.1908 | benign | -0.85 | Destabilizing | 0.863 | D | 0.584 | neutral | N | 0.436940428 | None | None | N |
C/G | 0.2669 | likely_benign | 0.2172 | benign | -1.538 | Destabilizing | 0.425 | N | 0.533 | neutral | N | 0.454486038 | None | None | N |
C/H | 0.5623 | ambiguous | 0.4332 | ambiguous | -1.576 | Destabilizing | 0.981 | D | 0.579 | neutral | None | None | None | None | N |
C/I | 0.3982 | ambiguous | 0.3387 | benign | -0.677 | Destabilizing | 0.329 | N | 0.477 | neutral | None | None | None | None | N |
C/K | 0.7471 | likely_pathogenic | 0.6371 | pathogenic | -0.6 | Destabilizing | 0.704 | D | 0.555 | neutral | None | None | None | None | N |
C/L | 0.3226 | likely_benign | 0.3092 | benign | -0.677 | Destabilizing | 0.176 | N | 0.389 | neutral | None | None | None | None | N |
C/M | 0.4486 | ambiguous | 0.4244 | ambiguous | -0.063 | Destabilizing | 0.037 | N | 0.339 | neutral | None | None | None | None | N |
C/N | 0.3939 | ambiguous | 0.3142 | benign | -0.411 | Destabilizing | 0.704 | D | 0.591 | neutral | None | None | None | None | N |
C/P | 0.5783 | likely_pathogenic | 0.6067 | pathogenic | -0.854 | Destabilizing | 0.828 | D | 0.58 | neutral | None | None | None | None | N |
C/Q | 0.567 | likely_pathogenic | 0.4695 | ambiguous | -0.464 | Destabilizing | 0.944 | D | 0.588 | neutral | None | None | None | None | N |
C/R | 0.5186 | ambiguous | 0.3868 | ambiguous | -0.358 | Destabilizing | 0.927 | D | 0.578 | neutral | N | 0.399326189 | None | None | N |
C/S | 0.2802 | likely_benign | 0.1943 | benign | -0.939 | Destabilizing | 0.27 | N | 0.471 | neutral | N | 0.408407032 | None | None | N |
C/T | 0.3697 | ambiguous | 0.2827 | benign | -0.735 | Destabilizing | 0.013 | N | 0.327 | neutral | None | None | None | None | N |
C/V | 0.3098 | likely_benign | 0.2765 | benign | -0.854 | Destabilizing | 0.013 | N | 0.321 | neutral | None | None | None | None | N |
C/W | 0.5418 | ambiguous | 0.4333 | ambiguous | -0.803 | Destabilizing | 0.993 | D | 0.572 | neutral | N | 0.437287144 | None | None | N |
C/Y | 0.3229 | likely_benign | 0.2467 | benign | -0.755 | Destabilizing | 0.975 | D | 0.585 | neutral | N | 0.418354667 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.