Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17850 | 53773;53774;53775 | chr2:178607054;178607053;178607052 | chr2:179471781;179471780;179471779 |
N2AB | 16209 | 48850;48851;48852 | chr2:178607054;178607053;178607052 | chr2:179471781;179471780;179471779 |
N2A | 15282 | 46069;46070;46071 | chr2:178607054;178607053;178607052 | chr2:179471781;179471780;179471779 |
N2B | 8785 | 26578;26579;26580 | chr2:178607054;178607053;178607052 | chr2:179471781;179471780;179471779 |
Novex-1 | 8910 | 26953;26954;26955 | chr2:178607054;178607053;178607052 | chr2:179471781;179471780;179471779 |
Novex-2 | 8977 | 27154;27155;27156 | chr2:178607054;178607053;178607052 | chr2:179471781;179471780;179471779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs780284047 | -0.399 | 0.799 | N | 0.559 | 0.272 | 0.316494231283 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/A | rs780284047 | -0.399 | 0.799 | N | 0.559 | 0.272 | 0.316494231283 | gnomAD-4.0.0 | 2.05544E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8002E-06 | 0 | 1.65942E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4957 | ambiguous | 0.4694 | ambiguous | -0.542 | Destabilizing | 0.799 | D | 0.559 | neutral | N | 0.514475704 | None | None | N |
E/C | 0.9369 | likely_pathogenic | 0.9377 | pathogenic | -0.374 | Destabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
E/D | 0.1908 | likely_benign | 0.1977 | benign | -1.027 | Destabilizing | 0.002 | N | 0.161 | neutral | N | 0.473437158 | None | None | N |
E/F | 0.9219 | likely_pathogenic | 0.9204 | pathogenic | 0.322 | Stabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
E/G | 0.6978 | likely_pathogenic | 0.648 | pathogenic | -0.952 | Destabilizing | 0.799 | D | 0.619 | neutral | N | 0.478406223 | None | None | N |
E/H | 0.8422 | likely_pathogenic | 0.8455 | pathogenic | 0.158 | Stabilizing | 0.991 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/I | 0.6293 | likely_pathogenic | 0.6539 | pathogenic | 0.591 | Stabilizing | 0.974 | D | 0.796 | deleterious | None | None | None | None | N |
E/K | 0.6742 | likely_pathogenic | 0.6716 | pathogenic | -0.522 | Destabilizing | 0.799 | D | 0.469 | neutral | N | 0.468998474 | None | None | N |
E/L | 0.7503 | likely_pathogenic | 0.7431 | pathogenic | 0.591 | Stabilizing | 0.974 | D | 0.735 | deleterious | None | None | None | None | N |
E/M | 0.7466 | likely_pathogenic | 0.738 | pathogenic | 0.905 | Stabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
E/N | 0.5876 | likely_pathogenic | 0.5919 | pathogenic | -1.139 | Destabilizing | 0.725 | D | 0.519 | neutral | None | None | None | None | N |
E/P | 0.9032 | likely_pathogenic | 0.9274 | pathogenic | 0.235 | Stabilizing | 0.974 | D | 0.63 | neutral | None | None | None | None | N |
E/Q | 0.4948 | ambiguous | 0.4765 | ambiguous | -0.939 | Destabilizing | 0.89 | D | 0.555 | neutral | N | 0.465226265 | None | None | N |
E/R | 0.7933 | likely_pathogenic | 0.8012 | pathogenic | -0.157 | Destabilizing | 0.974 | D | 0.547 | neutral | None | None | None | None | N |
E/S | 0.5249 | ambiguous | 0.495 | ambiguous | -1.477 | Destabilizing | 0.841 | D | 0.442 | neutral | None | None | None | None | N |
E/T | 0.4885 | ambiguous | 0.4808 | ambiguous | -1.126 | Destabilizing | 0.915 | D | 0.636 | neutral | None | None | None | None | N |
E/V | 0.4236 | ambiguous | 0.4415 | ambiguous | 0.235 | Stabilizing | 0.966 | D | 0.635 | neutral | N | 0.469505453 | None | None | N |
E/W | 0.97 | likely_pathogenic | 0.9719 | pathogenic | 0.58 | Stabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Y | 0.8737 | likely_pathogenic | 0.8784 | pathogenic | 0.594 | Stabilizing | 0.991 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.