Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17857 | 53794;53795;53796 | chr2:178607033;178607032;178607031 | chr2:179471760;179471759;179471758 |
N2AB | 16216 | 48871;48872;48873 | chr2:178607033;178607032;178607031 | chr2:179471760;179471759;179471758 |
N2A | 15289 | 46090;46091;46092 | chr2:178607033;178607032;178607031 | chr2:179471760;179471759;179471758 |
N2B | 8792 | 26599;26600;26601 | chr2:178607033;178607032;178607031 | chr2:179471760;179471759;179471758 |
Novex-1 | 8917 | 26974;26975;26976 | chr2:178607033;178607032;178607031 | chr2:179471760;179471759;179471758 |
Novex-2 | 8984 | 27175;27176;27177 | chr2:178607033;178607032;178607031 | chr2:179471760;179471759;179471758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1352428551 | -0.566 | 0.236 | N | 0.215 | 0.088 | 0.338834610459 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
V/A | rs1352428551 | -0.566 | 0.236 | N | 0.215 | 0.088 | 0.338834610459 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs1352428551 | -0.566 | 0.236 | N | 0.215 | 0.088 | 0.338834610459 | gnomAD-4.0.0 | 5.15981E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.60841E-06 | 0 | 0 |
V/F | rs1423994048 | -0.864 | 0.998 | N | 0.294 | 0.321 | 0.721568202884 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/F | rs1423994048 | -0.864 | 0.998 | N | 0.294 | 0.321 | 0.721568202884 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs1423994048 | -0.864 | 0.998 | N | 0.294 | 0.321 | 0.721568202884 | gnomAD-4.0.0 | 1.86471E-06 | None | None | None | None | I | None | 4.02555E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1423994048 | -0.251 | 0.979 | N | 0.42 | 0.115 | 0.360961692134 | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | I | None | 0 | 8.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1423994048 | -0.251 | 0.979 | N | 0.42 | 0.115 | 0.360961692134 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1423994048 | -0.251 | 0.979 | N | 0.42 | 0.115 | 0.360961692134 | gnomAD-4.0.0 | 3.72942E-06 | None | None | None | None | I | None | 0 | 1.01826E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.905 | N | 0.411 | 0.169 | 0.262662153117 | gnomAD-4.0.0 | 6.86396E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00589E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2604 | likely_benign | 0.3039 | benign | -1.408 | Destabilizing | 0.236 | N | 0.215 | neutral | N | 0.445018406 | None | None | I |
V/C | 0.7623 | likely_pathogenic | 0.8103 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.384 | neutral | None | None | None | None | I |
V/D | 0.761 | likely_pathogenic | 0.8146 | pathogenic | -1.614 | Destabilizing | 0.976 | D | 0.596 | neutral | N | 0.511339399 | None | None | I |
V/E | 0.4348 | ambiguous | 0.5047 | ambiguous | -1.689 | Destabilizing | 0.486 | N | 0.35 | neutral | None | None | None | None | I |
V/F | 0.4165 | ambiguous | 0.4731 | ambiguous | -1.445 | Destabilizing | 0.998 | D | 0.294 | neutral | N | 0.472731002 | None | None | I |
V/G | 0.4872 | ambiguous | 0.5477 | ambiguous | -1.627 | Destabilizing | 0.958 | D | 0.581 | neutral | N | 0.469858136 | None | None | I |
V/H | 0.7689 | likely_pathogenic | 0.8418 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.705 | prob.delet. | None | None | None | None | I |
V/I | 0.0907 | likely_benign | 0.0965 | benign | -0.932 | Destabilizing | 0.979 | D | 0.42 | neutral | N | 0.477976187 | None | None | I |
V/K | 0.3773 | ambiguous | 0.4889 | ambiguous | -1.115 | Destabilizing | 0.991 | D | 0.442 | neutral | None | None | None | None | I |
V/L | 0.3292 | likely_benign | 0.3883 | ambiguous | -0.932 | Destabilizing | 0.905 | D | 0.411 | neutral | N | 0.444498331 | None | None | I |
V/M | 0.1865 | likely_benign | 0.21 | benign | -0.576 | Destabilizing | 0.998 | D | 0.307 | neutral | None | None | None | None | I |
V/N | 0.5365 | ambiguous | 0.606 | pathogenic | -0.886 | Destabilizing | 0.995 | D | 0.727 | deleterious | None | None | None | None | I |
V/P | 0.9773 | likely_pathogenic | 0.9796 | pathogenic | -1.057 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | I |
V/Q | 0.3363 | likely_benign | 0.4277 | ambiguous | -1.213 | Destabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | I |
V/R | 0.3528 | ambiguous | 0.4923 | ambiguous | -0.443 | Destabilizing | 0.991 | D | 0.731 | deleterious | None | None | None | None | I |
V/S | 0.3352 | likely_benign | 0.4003 | ambiguous | -1.272 | Destabilizing | 0.939 | D | 0.476 | neutral | None | None | None | None | I |
V/T | 0.2146 | likely_benign | 0.2529 | benign | -1.258 | Destabilizing | 0.968 | D | 0.375 | neutral | None | None | None | None | I |
V/W | 0.9454 | likely_pathogenic | 0.963 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
V/Y | 0.8039 | likely_pathogenic | 0.8514 | pathogenic | -1.265 | Destabilizing | 0.998 | D | 0.293 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.