Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17868 | 53827;53828;53829 | chr2:178605693;178605692;178605691 | chr2:179470420;179470419;179470418 |
N2AB | 16227 | 48904;48905;48906 | chr2:178605693;178605692;178605691 | chr2:179470420;179470419;179470418 |
N2A | 15300 | 46123;46124;46125 | chr2:178605693;178605692;178605691 | chr2:179470420;179470419;179470418 |
N2B | 8803 | 26632;26633;26634 | chr2:178605693;178605692;178605691 | chr2:179470420;179470419;179470418 |
Novex-1 | 8928 | 27007;27008;27009 | chr2:178605693;178605692;178605691 | chr2:179470420;179470419;179470418 |
Novex-2 | 8995 | 27208;27209;27210 | chr2:178605693;178605692;178605691 | chr2:179470420;179470419;179470418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.92 | N | 0.488 | 0.262 | 0.268211541103 | gnomAD-4.0.0 | 1.69458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.83382E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8171 | likely_pathogenic | 0.777 | pathogenic | -0.004 | Destabilizing | 0.863 | D | 0.454 | neutral | None | None | None | None | N |
R/C | 0.574 | likely_pathogenic | 0.5219 | ambiguous | -0.08 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | N |
R/D | 0.8757 | likely_pathogenic | 0.8614 | pathogenic | -0.078 | Destabilizing | 0.969 | D | 0.446 | neutral | None | None | None | None | N |
R/E | 0.762 | likely_pathogenic | 0.7241 | pathogenic | -0.014 | Destabilizing | 0.863 | D | 0.472 | neutral | None | None | None | None | N |
R/F | 0.8552 | likely_pathogenic | 0.8169 | pathogenic | -0.187 | Destabilizing | 0.997 | D | 0.459 | neutral | None | None | None | None | N |
R/G | 0.6668 | likely_pathogenic | 0.611 | pathogenic | -0.209 | Destabilizing | 0.959 | D | 0.471 | neutral | N | 0.405366727 | None | None | N |
R/H | 0.2536 | likely_benign | 0.2286 | benign | -0.707 | Destabilizing | 0.997 | D | 0.515 | neutral | None | None | None | None | N |
R/I | 0.743 | likely_pathogenic | 0.6928 | pathogenic | 0.503 | Stabilizing | 0.997 | D | 0.468 | neutral | None | None | None | None | N |
R/K | 0.2 | likely_benign | 0.1938 | benign | -0.059 | Destabilizing | 0.021 | N | 0.174 | neutral | N | 0.368773995 | None | None | N |
R/L | 0.6365 | likely_pathogenic | 0.5837 | pathogenic | 0.503 | Stabilizing | 0.969 | D | 0.471 | neutral | None | None | None | None | N |
R/M | 0.6696 | likely_pathogenic | 0.6153 | pathogenic | 0.095 | Stabilizing | 0.996 | D | 0.487 | neutral | N | 0.476114891 | None | None | N |
R/N | 0.7752 | likely_pathogenic | 0.7437 | pathogenic | 0.234 | Stabilizing | 0.969 | D | 0.505 | neutral | None | None | None | None | N |
R/P | 0.9659 | likely_pathogenic | 0.9263 | pathogenic | 0.355 | Stabilizing | 0.997 | D | 0.449 | neutral | None | None | None | None | N |
R/Q | 0.2775 | likely_benign | 0.2468 | benign | 0.115 | Stabilizing | 0.939 | D | 0.538 | neutral | None | None | None | None | N |
R/S | 0.8598 | likely_pathogenic | 0.8215 | pathogenic | -0.127 | Destabilizing | 0.92 | D | 0.488 | neutral | N | 0.415989152 | None | None | N |
R/T | 0.7631 | likely_pathogenic | 0.7048 | pathogenic | 0.072 | Stabilizing | 0.959 | D | 0.484 | neutral | N | 0.429187736 | None | None | N |
R/V | 0.7971 | likely_pathogenic | 0.7406 | pathogenic | 0.355 | Stabilizing | 0.991 | D | 0.425 | neutral | None | None | None | None | N |
R/W | 0.5716 | likely_pathogenic | 0.48 | ambiguous | -0.217 | Destabilizing | 0.999 | D | 0.576 | neutral | N | 0.49487401 | None | None | N |
R/Y | 0.695 | likely_pathogenic | 0.63 | pathogenic | 0.184 | Stabilizing | 0.997 | D | 0.477 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.