Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17869 | 53830;53831;53832 | chr2:178605690;178605689;178605688 | chr2:179470417;179470416;179470415 |
N2AB | 16228 | 48907;48908;48909 | chr2:178605690;178605689;178605688 | chr2:179470417;179470416;179470415 |
N2A | 15301 | 46126;46127;46128 | chr2:178605690;178605689;178605688 | chr2:179470417;179470416;179470415 |
N2B | 8804 | 26635;26636;26637 | chr2:178605690;178605689;178605688 | chr2:179470417;179470416;179470415 |
Novex-1 | 8929 | 27010;27011;27012 | chr2:178605690;178605689;178605688 | chr2:179470417;179470416;179470415 |
Novex-2 | 8996 | 27211;27212;27213 | chr2:178605690;178605689;178605688 | chr2:179470417;179470416;179470415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.995 | D | 0.779 | 0.579 | 0.85618202773 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.963 | likely_pathogenic | 0.9528 | pathogenic | -2.393 | Highly Destabilizing | 0.959 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/C | 0.9121 | likely_pathogenic | 0.875 | pathogenic | -1.858 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -2.465 | Highly Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
L/E | 0.9952 | likely_pathogenic | 0.9955 | pathogenic | -2.29 | Highly Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
L/F | 0.5346 | ambiguous | 0.3887 | ambiguous | -1.485 | Destabilizing | 0.011 | N | 0.31 | neutral | D | 0.525474637 | None | None | N |
L/G | 0.9904 | likely_pathogenic | 0.9893 | pathogenic | -2.894 | Highly Destabilizing | 0.988 | D | 0.798 | deleterious | None | None | None | None | N |
L/H | 0.9874 | likely_pathogenic | 0.9857 | pathogenic | -2.316 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | D | 0.531496399 | None | None | N |
L/I | 0.2693 | likely_benign | 0.2571 | benign | -0.974 | Destabilizing | 0.811 | D | 0.703 | prob.neutral | D | 0.523338409 | None | None | N |
L/K | 0.9906 | likely_pathogenic | 0.992 | pathogenic | -1.758 | Destabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
L/M | 0.4063 | ambiguous | 0.3289 | benign | -1.027 | Destabilizing | 0.988 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/N | 0.9909 | likely_pathogenic | 0.9912 | pathogenic | -1.958 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
L/P | 0.9536 | likely_pathogenic | 0.9304 | pathogenic | -1.425 | Destabilizing | 0.995 | D | 0.812 | deleterious | N | 0.482473221 | None | None | N |
L/Q | 0.9832 | likely_pathogenic | 0.9828 | pathogenic | -1.902 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
L/R | 0.9847 | likely_pathogenic | 0.9867 | pathogenic | -1.439 | Destabilizing | 0.995 | D | 0.779 | deleterious | D | 0.531496399 | None | None | N |
L/S | 0.9947 | likely_pathogenic | 0.9937 | pathogenic | -2.673 | Highly Destabilizing | 0.988 | D | 0.772 | deleterious | None | None | None | None | N |
L/T | 0.9663 | likely_pathogenic | 0.9646 | pathogenic | -2.356 | Highly Destabilizing | 0.988 | D | 0.785 | deleterious | None | None | None | None | N |
L/V | 0.3208 | likely_benign | 0.3178 | benign | -1.425 | Destabilizing | 0.896 | D | 0.719 | prob.delet. | N | 0.498418535 | None | None | N |
L/W | 0.9639 | likely_pathogenic | 0.9486 | pathogenic | -1.789 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/Y | 0.9608 | likely_pathogenic | 0.944 | pathogenic | -1.502 | Destabilizing | 0.851 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.