Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17871 | 53836;53837;53838 | chr2:178605684;178605683;178605682 | chr2:179470411;179470410;179470409 |
N2AB | 16230 | 48913;48914;48915 | chr2:178605684;178605683;178605682 | chr2:179470411;179470410;179470409 |
N2A | 15303 | 46132;46133;46134 | chr2:178605684;178605683;178605682 | chr2:179470411;179470410;179470409 |
N2B | 8806 | 26641;26642;26643 | chr2:178605684;178605683;178605682 | chr2:179470411;179470410;179470409 |
Novex-1 | 8931 | 27016;27017;27018 | chr2:178605684;178605683;178605682 | chr2:179470411;179470410;179470409 |
Novex-2 | 8998 | 27217;27218;27219 | chr2:178605684;178605683;178605682 | chr2:179470411;179470410;179470409 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.799 | 0.254 | 0.514811571519 | gnomAD-4.0.0 | 6.97927E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.13397E-07 | 0 | 0 |
Y/N | None | None | 0.999 | N | 0.825 | 0.47 | 0.70133364227 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9571 | likely_pathogenic | 0.9307 | pathogenic | -2.173 | Highly Destabilizing | 0.996 | D | 0.704 | prob.neutral | None | None | None | None | N |
Y/C | 0.7092 | likely_pathogenic | 0.5826 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.474728025 | None | None | N |
Y/D | 0.9888 | likely_pathogenic | 0.9792 | pathogenic | -0.646 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.515747928 | None | None | N |
Y/E | 0.9963 | likely_pathogenic | 0.9934 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/F | 0.1742 | likely_benign | 0.1512 | benign | -0.829 | Destabilizing | 0.994 | D | 0.587 | neutral | N | 0.459929144 | None | None | N |
Y/G | 0.9675 | likely_pathogenic | 0.9486 | pathogenic | -2.515 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/H | 0.9205 | likely_pathogenic | 0.879 | pathogenic | -0.898 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.496892808 | None | None | N |
Y/I | 0.8929 | likely_pathogenic | 0.8627 | pathogenic | -1.13 | Destabilizing | 0.784 | D | 0.356 | neutral | None | None | None | None | N |
Y/K | 0.9955 | likely_pathogenic | 0.992 | pathogenic | -1.36 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/L | 0.887 | likely_pathogenic | 0.8531 | pathogenic | -1.13 | Destabilizing | 0.96 | D | 0.587 | neutral | None | None | None | None | N |
Y/M | 0.9508 | likely_pathogenic | 0.9287 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Y/N | 0.9543 | likely_pathogenic | 0.923 | pathogenic | -1.829 | Destabilizing | 0.999 | D | 0.825 | deleterious | N | 0.471102068 | None | None | N |
Y/P | 0.9785 | likely_pathogenic | 0.9779 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/Q | 0.9928 | likely_pathogenic | 0.9866 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Y/R | 0.9855 | likely_pathogenic | 0.9758 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/S | 0.9173 | likely_pathogenic | 0.8651 | pathogenic | -2.412 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.485425021 | None | None | N |
Y/T | 0.9698 | likely_pathogenic | 0.9466 | pathogenic | -2.187 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
Y/V | 0.8028 | likely_pathogenic | 0.7432 | pathogenic | -1.474 | Destabilizing | 0.983 | D | 0.595 | neutral | None | None | None | None | N |
Y/W | 0.6672 | likely_pathogenic | 0.619 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.