Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17875 | 53848;53849;53850 | chr2:178605672;178605671;178605670 | chr2:179470399;179470398;179470397 |
N2AB | 16234 | 48925;48926;48927 | chr2:178605672;178605671;178605670 | chr2:179470399;179470398;179470397 |
N2A | 15307 | 46144;46145;46146 | chr2:178605672;178605671;178605670 | chr2:179470399;179470398;179470397 |
N2B | 8810 | 26653;26654;26655 | chr2:178605672;178605671;178605670 | chr2:179470399;179470398;179470397 |
Novex-1 | 8935 | 27028;27029;27030 | chr2:178605672;178605671;178605670 | chr2:179470399;179470398;179470397 |
Novex-2 | 9002 | 27229;27230;27231 | chr2:178605672;178605671;178605670 | chr2:179470399;179470398;179470397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs750095768 | 0.051 | 1.0 | N | 0.769 | 0.432 | 0.551961605406 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.06E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6661 | likely_pathogenic | 0.5619 | ambiguous | -0.753 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.481705267 | None | None | N |
T/C | 0.9059 | likely_pathogenic | 0.8752 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
T/D | 0.8453 | likely_pathogenic | 0.8277 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
T/E | 0.9068 | likely_pathogenic | 0.8834 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
T/F | 0.9535 | likely_pathogenic | 0.9335 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
T/G | 0.4987 | ambiguous | 0.4009 | ambiguous | -1.052 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/H | 0.8298 | likely_pathogenic | 0.7909 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/I | 0.9755 | likely_pathogenic | 0.9624 | pathogenic | -0.033 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.502393643 | None | None | N |
T/K | 0.808 | likely_pathogenic | 0.7651 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.475197581 | None | None | N |
T/L | 0.7863 | likely_pathogenic | 0.6996 | pathogenic | -0.033 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/M | 0.6302 | likely_pathogenic | 0.5243 | ambiguous | 0.279 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/N | 0.4453 | ambiguous | 0.4009 | ambiguous | -1.056 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/P | 0.9623 | likely_pathogenic | 0.9489 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.507001999 | None | None | N |
T/Q | 0.7612 | likely_pathogenic | 0.7139 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/R | 0.8039 | likely_pathogenic | 0.7558 | pathogenic | -0.653 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.522178042 | None | None | N |
T/S | 0.2852 | likely_benign | 0.2429 | benign | -1.201 | Destabilizing | 0.999 | D | 0.533 | neutral | N | 0.486427885 | None | None | N |
T/V | 0.9128 | likely_pathogenic | 0.8723 | pathogenic | -0.24 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
T/W | 0.9848 | likely_pathogenic | 0.9797 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/Y | 0.9382 | likely_pathogenic | 0.918 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.