Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17878 | 53857;53858;53859 | chr2:178605663;178605662;178605661 | chr2:179470390;179470389;179470388 |
N2AB | 16237 | 48934;48935;48936 | chr2:178605663;178605662;178605661 | chr2:179470390;179470389;179470388 |
N2A | 15310 | 46153;46154;46155 | chr2:178605663;178605662;178605661 | chr2:179470390;179470389;179470388 |
N2B | 8813 | 26662;26663;26664 | chr2:178605663;178605662;178605661 | chr2:179470390;179470389;179470388 |
Novex-1 | 8938 | 27037;27038;27039 | chr2:178605663;178605662;178605661 | chr2:179470390;179470389;179470388 |
Novex-2 | 9005 | 27238;27239;27240 | chr2:178605663;178605662;178605661 | chr2:179470390;179470389;179470388 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.984 | N | 0.727 | 0.31 | 0.462461958149 | gnomAD-4.0.0 | 1.60683E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89039E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1947 | likely_benign | 0.1677 | benign | -1.13 | Destabilizing | 0.64 | D | 0.449 | neutral | N | 0.489564191 | None | None | N |
T/C | 0.5799 | likely_pathogenic | 0.5441 | ambiguous | -0.895 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/D | 0.7971 | likely_pathogenic | 0.7784 | pathogenic | -0.945 | Destabilizing | 0.919 | D | 0.664 | neutral | None | None | None | None | N |
T/E | 0.7601 | likely_pathogenic | 0.7266 | pathogenic | -0.829 | Destabilizing | 0.919 | D | 0.659 | neutral | None | None | None | None | N |
T/F | 0.5861 | likely_pathogenic | 0.5767 | pathogenic | -0.919 | Destabilizing | 0.996 | D | 0.774 | deleterious | None | None | None | None | N |
T/G | 0.395 | ambiguous | 0.354 | ambiguous | -1.489 | Destabilizing | 0.851 | D | 0.611 | neutral | None | None | None | None | N |
T/H | 0.4909 | ambiguous | 0.4646 | ambiguous | -1.637 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
T/I | 0.773 | likely_pathogenic | 0.7383 | pathogenic | -0.225 | Destabilizing | 0.984 | D | 0.727 | prob.delet. | N | 0.48108293 | None | None | N |
T/K | 0.6619 | likely_pathogenic | 0.6447 | pathogenic | -0.734 | Destabilizing | 0.919 | D | 0.66 | neutral | None | None | None | None | N |
T/L | 0.4242 | ambiguous | 0.3939 | ambiguous | -0.225 | Destabilizing | 0.919 | D | 0.611 | neutral | None | None | None | None | N |
T/M | 0.2327 | likely_benign | 0.2081 | benign | -0.083 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/N | 0.3118 | likely_benign | 0.2828 | benign | -1.1 | Destabilizing | 0.896 | D | 0.569 | neutral | N | 0.506341798 | None | None | N |
T/P | 0.9776 | likely_pathogenic | 0.9708 | pathogenic | -0.494 | Destabilizing | 0.984 | D | 0.725 | prob.delet. | N | 0.487666295 | None | None | N |
T/Q | 0.5332 | ambiguous | 0.4981 | ambiguous | -1.089 | Destabilizing | 0.988 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/R | 0.5988 | likely_pathogenic | 0.5669 | pathogenic | -0.704 | Destabilizing | 0.976 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/S | 0.1094 | likely_benign | 0.0981 | benign | -1.397 | Destabilizing | 0.046 | N | 0.211 | neutral | N | 0.382524366 | None | None | N |
T/V | 0.5368 | ambiguous | 0.497 | ambiguous | -0.494 | Destabilizing | 0.919 | D | 0.536 | neutral | None | None | None | None | N |
T/W | 0.8864 | likely_pathogenic | 0.881 | pathogenic | -0.906 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
T/Y | 0.587 | likely_pathogenic | 0.582 | pathogenic | -0.611 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.