Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1788 | 5587;5588;5589 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
N2AB | 1788 | 5587;5588;5589 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
N2A | 1788 | 5587;5588;5589 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
N2B | 1742 | 5449;5450;5451 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
Novex-1 | 1742 | 5449;5450;5451 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
Novex-2 | 1742 | 5449;5450;5451 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
Novex-3 | 1788 | 5587;5588;5589 | chr2:178776502;178776501;178776500 | chr2:179641229;179641228;179641227 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs760787459 | 0.258 | 1.0 | D | 0.879 | 0.531 | 0.602907052046 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.83E-06 | 0 |
T/I | rs760787459 | 0.258 | 1.0 | D | 0.879 | 0.531 | 0.602907052046 | gnomAD-4.0.0 | 4.12045E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03931E-05 | None | 0 | 0 | 3.59729E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3603 | ambiguous | 0.444 | ambiguous | -1.049 | Destabilizing | 0.999 | D | 0.627 | neutral | N | 0.502445291 | None | None | N |
T/C | 0.757 | likely_pathogenic | 0.848 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
T/D | 0.9667 | likely_pathogenic | 0.9714 | pathogenic | -1.276 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
T/E | 0.973 | likely_pathogenic | 0.9791 | pathogenic | -1.141 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
T/F | 0.9462 | likely_pathogenic | 0.9744 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
T/G | 0.7938 | likely_pathogenic | 0.834 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
T/H | 0.8951 | likely_pathogenic | 0.9273 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
T/I | 0.8636 | likely_pathogenic | 0.9208 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.603003282 | None | None | N |
T/K | 0.9756 | likely_pathogenic | 0.9815 | pathogenic | -0.813 | Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.588362732 | None | None | N |
T/L | 0.7136 | likely_pathogenic | 0.8047 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
T/M | 0.577 | likely_pathogenic | 0.6976 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
T/N | 0.7067 | likely_pathogenic | 0.7618 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/P | 0.9655 | likely_pathogenic | 0.9661 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.666718035 | None | None | N |
T/Q | 0.9244 | likely_pathogenic | 0.9456 | pathogenic | -1.119 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
T/R | 0.9611 | likely_pathogenic | 0.971 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.602578694 | None | None | N |
T/S | 0.2895 | likely_benign | 0.2946 | benign | -1.434 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.473869597 | None | None | N |
T/V | 0.6723 | likely_pathogenic | 0.7704 | pathogenic | -0.343 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | N |
T/W | 0.9892 | likely_pathogenic | 0.9941 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
T/Y | 0.9514 | likely_pathogenic | 0.9749 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.