Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17882 | 53869;53870;53871 | chr2:178605651;178605650;178605649 | chr2:179470378;179470377;179470376 |
N2AB | 16241 | 48946;48947;48948 | chr2:178605651;178605650;178605649 | chr2:179470378;179470377;179470376 |
N2A | 15314 | 46165;46166;46167 | chr2:178605651;178605650;178605649 | chr2:179470378;179470377;179470376 |
N2B | 8817 | 26674;26675;26676 | chr2:178605651;178605650;178605649 | chr2:179470378;179470377;179470376 |
Novex-1 | 8942 | 27049;27050;27051 | chr2:178605651;178605650;178605649 | chr2:179470378;179470377;179470376 |
Novex-2 | 9009 | 27250;27251;27252 | chr2:178605651;178605650;178605649 | chr2:179470378;179470377;179470376 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.959 | N | 0.397 | 0.133 | 0.209622950755 | gnomAD-4.0.0 | 4.79926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.62589E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4023 | ambiguous | 0.3905 | ambiguous | -0.969 | Destabilizing | 0.061 | N | 0.438 | neutral | N | 0.379297633 | None | None | N |
D/C | 0.8521 | likely_pathogenic | 0.8496 | pathogenic | -0.436 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
D/E | 0.3317 | likely_benign | 0.3182 | benign | -0.775 | Destabilizing | 0.134 | N | 0.185 | neutral | N | 0.401787704 | None | None | N |
D/F | 0.8151 | likely_pathogenic | 0.8001 | pathogenic | -0.918 | Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | N |
D/G | 0.5558 | ambiguous | 0.5307 | ambiguous | -1.314 | Destabilizing | 0.826 | D | 0.441 | neutral | N | 0.426686148 | None | None | N |
D/H | 0.5352 | ambiguous | 0.5256 | ambiguous | -1.133 | Destabilizing | 0.996 | D | 0.547 | neutral | N | 0.425608713 | None | None | N |
D/I | 0.6631 | likely_pathogenic | 0.6436 | pathogenic | -0.045 | Destabilizing | 0.982 | D | 0.605 | neutral | None | None | None | None | N |
D/K | 0.7861 | likely_pathogenic | 0.7809 | pathogenic | -0.561 | Destabilizing | 0.884 | D | 0.449 | neutral | None | None | None | None | N |
D/L | 0.6227 | likely_pathogenic | 0.6118 | pathogenic | -0.045 | Destabilizing | 0.939 | D | 0.507 | neutral | None | None | None | None | N |
D/M | 0.825 | likely_pathogenic | 0.8031 | pathogenic | 0.552 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
D/N | 0.23 | likely_benign | 0.2229 | benign | -0.89 | Destabilizing | 0.959 | D | 0.397 | neutral | N | 0.443423683 | None | None | N |
D/P | 0.9944 | likely_pathogenic | 0.9938 | pathogenic | -0.33 | Destabilizing | 0.991 | D | 0.535 | neutral | None | None | None | None | N |
D/Q | 0.6135 | likely_pathogenic | 0.5838 | pathogenic | -0.764 | Destabilizing | 0.939 | D | 0.461 | neutral | None | None | None | None | N |
D/R | 0.7634 | likely_pathogenic | 0.7537 | pathogenic | -0.524 | Destabilizing | 0.046 | N | 0.484 | neutral | None | None | None | None | N |
D/S | 0.2937 | likely_benign | 0.2768 | benign | -1.303 | Destabilizing | 0.759 | D | 0.426 | neutral | None | None | None | None | N |
D/T | 0.4458 | ambiguous | 0.4332 | ambiguous | -0.996 | Destabilizing | 0.17 | N | 0.307 | neutral | None | None | None | None | N |
D/V | 0.4818 | ambiguous | 0.4558 | ambiguous | -0.33 | Destabilizing | 0.92 | D | 0.505 | neutral | N | 0.441212884 | None | None | N |
D/W | 0.9645 | likely_pathogenic | 0.9594 | pathogenic | -0.81 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
D/Y | 0.5184 | ambiguous | 0.512 | ambiguous | -0.663 | Destabilizing | 0.996 | D | 0.605 | neutral | N | 0.497412883 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.