Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17885 | 53878;53879;53880 | chr2:178605642;178605641;178605640 | chr2:179470369;179470368;179470367 |
N2AB | 16244 | 48955;48956;48957 | chr2:178605642;178605641;178605640 | chr2:179470369;179470368;179470367 |
N2A | 15317 | 46174;46175;46176 | chr2:178605642;178605641;178605640 | chr2:179470369;179470368;179470367 |
N2B | 8820 | 26683;26684;26685 | chr2:178605642;178605641;178605640 | chr2:179470369;179470368;179470367 |
Novex-1 | 8945 | 27058;27059;27060 | chr2:178605642;178605641;178605640 | chr2:179470369;179470368;179470367 |
Novex-2 | 9012 | 27259;27260;27261 | chr2:178605642;178605641;178605640 | chr2:179470369;179470368;179470367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.301 | N | 0.449 | 0.069 | 0.17948927462 | gnomAD-4.0.0 | 6.85348E-07 | None | None | None | None | N | None | 2.99778E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1314 | likely_benign | 0.1051 | benign | -0.133 | Destabilizing | None | N | 0.208 | neutral | N | 0.373774383 | None | None | N |
E/C | 0.841 | likely_pathogenic | 0.7975 | pathogenic | -0.371 | Destabilizing | 0.883 | D | 0.451 | neutral | None | None | None | None | N |
E/D | 0.236 | likely_benign | 0.2003 | benign | -0.901 | Destabilizing | 0.081 | N | 0.421 | neutral | N | 0.47628825 | None | None | N |
E/F | 0.8289 | likely_pathogenic | 0.7468 | pathogenic | 0.546 | Stabilizing | 0.667 | D | 0.493 | neutral | None | None | None | None | N |
E/G | 0.3303 | likely_benign | 0.2636 | benign | -0.454 | Destabilizing | 0.042 | N | 0.382 | neutral | N | 0.438327294 | None | None | N |
E/H | 0.6757 | likely_pathogenic | 0.5704 | pathogenic | 0.782 | Stabilizing | 0.859 | D | 0.528 | neutral | None | None | None | None | N |
E/I | 0.3572 | ambiguous | 0.2589 | benign | 0.72 | Stabilizing | 0.124 | N | 0.465 | neutral | None | None | None | None | N |
E/K | 0.2934 | likely_benign | 0.2313 | benign | 0.088 | Stabilizing | 0.081 | N | 0.425 | neutral | N | 0.383492732 | None | None | N |
E/L | 0.3557 | ambiguous | 0.2853 | benign | 0.72 | Stabilizing | 0.055 | N | 0.368 | neutral | None | None | None | None | N |
E/M | 0.4443 | ambiguous | 0.3491 | ambiguous | 0.602 | Stabilizing | 0.667 | D | 0.485 | neutral | None | None | None | None | N |
E/N | 0.4527 | ambiguous | 0.34 | ambiguous | -0.652 | Destabilizing | 0.364 | N | 0.479 | neutral | None | None | None | None | N |
E/P | 0.175 | likely_benign | 0.1385 | benign | 0.458 | Stabilizing | None | N | 0.215 | neutral | None | None | None | None | N |
E/Q | 0.1913 | likely_benign | 0.155 | benign | -0.488 | Destabilizing | 0.301 | N | 0.449 | neutral | N | 0.430246529 | None | None | N |
E/R | 0.4536 | ambiguous | 0.3703 | ambiguous | 0.512 | Stabilizing | 0.22 | N | 0.477 | neutral | None | None | None | None | N |
E/S | 0.3186 | likely_benign | 0.2323 | benign | -0.818 | Destabilizing | 0.055 | N | 0.403 | neutral | None | None | None | None | N |
E/T | 0.3095 | likely_benign | 0.2159 | benign | -0.526 | Destabilizing | 0.104 | N | 0.399 | neutral | None | None | None | None | N |
E/V | 0.2248 | likely_benign | 0.1656 | benign | 0.458 | Stabilizing | 0.001 | N | 0.291 | neutral | N | 0.444349189 | None | None | N |
E/W | 0.9573 | likely_pathogenic | 0.9267 | pathogenic | 0.769 | Stabilizing | 0.958 | D | 0.495 | neutral | None | None | None | None | N |
E/Y | 0.7284 | likely_pathogenic | 0.6344 | pathogenic | 0.826 | Stabilizing | 0.859 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.