Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17889 | 53890;53891;53892 | chr2:178605630;178605629;178605628 | chr2:179470357;179470356;179470355 |
N2AB | 16248 | 48967;48968;48969 | chr2:178605630;178605629;178605628 | chr2:179470357;179470356;179470355 |
N2A | 15321 | 46186;46187;46188 | chr2:178605630;178605629;178605628 | chr2:179470357;179470356;179470355 |
N2B | 8824 | 26695;26696;26697 | chr2:178605630;178605629;178605628 | chr2:179470357;179470356;179470355 |
Novex-1 | 8949 | 27070;27071;27072 | chr2:178605630;178605629;178605628 | chr2:179470357;179470356;179470355 |
Novex-2 | 9016 | 27271;27272;27273 | chr2:178605630;178605629;178605628 | chr2:179470357;179470356;179470355 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.295 | N | 0.396 | 0.08 | 0.195762928549 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
N/S | rs1457628589 | -0.492 | 0.005 | N | 0.167 | 0.165 | 0.208816687407 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
N/S | rs1457628589 | -0.492 | 0.005 | N | 0.167 | 0.165 | 0.208816687407 | gnomAD-4.0.0 | 1.6413E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.87803E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4181 | ambiguous | 0.3854 | ambiguous | -0.696 | Destabilizing | 0.031 | N | 0.465 | neutral | None | None | None | None | I |
N/C | 0.5592 | ambiguous | 0.5191 | ambiguous | 0.126 | Stabilizing | 0.864 | D | 0.468 | neutral | None | None | None | None | I |
N/D | 0.0603 | likely_benign | 0.0561 | benign | -0.618 | Destabilizing | None | N | 0.077 | neutral | N | 0.337333581 | None | None | I |
N/E | 0.6779 | likely_pathogenic | 0.6493 | pathogenic | -0.602 | Destabilizing | 0.003 | N | 0.16 | neutral | None | None | None | None | I |
N/F | 0.855 | likely_pathogenic | 0.8367 | pathogenic | -0.937 | Destabilizing | 0.628 | D | 0.479 | neutral | None | None | None | None | I |
N/G | 0.4848 | ambiguous | 0.4027 | ambiguous | -0.932 | Destabilizing | 0.014 | N | 0.155 | neutral | None | None | None | None | I |
N/H | 0.3099 | likely_benign | 0.3144 | benign | -0.989 | Destabilizing | 0.295 | N | 0.396 | neutral | N | 0.481712712 | None | None | I |
N/I | 0.642 | likely_pathogenic | 0.6275 | pathogenic | -0.138 | Destabilizing | 0.295 | N | 0.496 | neutral | N | 0.475056099 | None | None | I |
N/K | 0.7436 | likely_pathogenic | 0.749 | pathogenic | -0.046 | Destabilizing | 0.024 | N | 0.255 | neutral | N | 0.513438341 | None | None | I |
N/L | 0.5923 | likely_pathogenic | 0.5462 | ambiguous | -0.138 | Destabilizing | 0.072 | N | 0.507 | neutral | None | None | None | None | I |
N/M | 0.7035 | likely_pathogenic | 0.6737 | pathogenic | 0.531 | Stabilizing | 0.628 | D | 0.45 | neutral | None | None | None | None | I |
N/P | 0.7733 | likely_pathogenic | 0.7244 | pathogenic | -0.297 | Destabilizing | 0.136 | N | 0.481 | neutral | None | None | None | None | I |
N/Q | 0.6794 | likely_pathogenic | 0.654 | pathogenic | -0.784 | Destabilizing | 0.072 | N | 0.259 | neutral | None | None | None | None | I |
N/R | 0.7326 | likely_pathogenic | 0.7326 | pathogenic | 0.04 | Stabilizing | 0.072 | N | 0.265 | neutral | None | None | None | None | I |
N/S | 0.1069 | likely_benign | 0.1029 | benign | -0.508 | Destabilizing | 0.005 | N | 0.167 | neutral | N | 0.44694399 | None | None | I |
N/T | 0.1867 | likely_benign | 0.1768 | benign | -0.328 | Destabilizing | 0.024 | N | 0.26 | neutral | N | 0.447925425 | None | None | I |
N/V | 0.5604 | ambiguous | 0.5288 | ambiguous | -0.297 | Destabilizing | 0.136 | N | 0.503 | neutral | None | None | None | None | I |
N/W | 0.942 | likely_pathogenic | 0.9395 | pathogenic | -0.775 | Destabilizing | 0.864 | D | 0.505 | neutral | None | None | None | None | I |
N/Y | 0.4516 | ambiguous | 0.4458 | ambiguous | -0.521 | Destabilizing | 0.56 | D | 0.465 | neutral | N | 0.477711887 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.