Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1789 | 5590;5591;5592 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
N2AB | 1789 | 5590;5591;5592 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
N2A | 1789 | 5590;5591;5592 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
N2B | 1743 | 5452;5453;5454 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
Novex-1 | 1743 | 5452;5453;5454 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
Novex-2 | 1743 | 5452;5453;5454 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
Novex-3 | 1789 | 5590;5591;5592 | chr2:178776499;178776498;178776497 | chr2:179641226;179641225;179641224 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs2092243043 | None | 1.0 | D | 0.911 | 0.609 | 0.754366180968 | gnomAD-4.0.0 | 3.21046E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7135E-06 | 0 | 0 |
S/P | rs775865795 | -0.319 | 1.0 | D | 0.879 | 0.656 | 0.554681544945 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 5.52E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1756 | likely_benign | 0.1904 | benign | -0.635 | Destabilizing | 0.997 | D | 0.558 | neutral | D | 0.539379265 | None | None | N |
S/C | 0.5673 | likely_pathogenic | 0.5956 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.769055346 | None | None | N |
S/D | 0.945 | likely_pathogenic | 0.9526 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/E | 0.9146 | likely_pathogenic | 0.9317 | pathogenic | -0.278 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/F | 0.7946 | likely_pathogenic | 0.8274 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.682533259 | None | None | N |
S/G | 0.4163 | ambiguous | 0.4425 | ambiguous | -0.865 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
S/H | 0.8205 | likely_pathogenic | 0.8444 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/I | 0.7159 | likely_pathogenic | 0.7745 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
S/K | 0.9698 | likely_pathogenic | 0.9786 | pathogenic | -0.75 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/L | 0.529 | ambiguous | 0.5766 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
S/M | 0.5645 | likely_pathogenic | 0.6063 | pathogenic | 0.216 | Stabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
S/N | 0.614 | likely_pathogenic | 0.6934 | pathogenic | -0.602 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/P | 0.9834 | likely_pathogenic | 0.9845 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.671625738 | None | None | N |
S/Q | 0.8268 | likely_pathogenic | 0.8591 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
S/R | 0.958 | likely_pathogenic | 0.9685 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/T | 0.1626 | likely_benign | 0.1864 | benign | -0.631 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.508849021 | None | None | N |
S/V | 0.5749 | likely_pathogenic | 0.6418 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
S/W | 0.9263 | likely_pathogenic | 0.9268 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
S/Y | 0.7662 | likely_pathogenic | 0.7943 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.694984956 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.