Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17890 | 53893;53894;53895 | chr2:178605627;178605626;178605625 | chr2:179470354;179470353;179470352 |
N2AB | 16249 | 48970;48971;48972 | chr2:178605627;178605626;178605625 | chr2:179470354;179470353;179470352 |
N2A | 15322 | 46189;46190;46191 | chr2:178605627;178605626;178605625 | chr2:179470354;179470353;179470352 |
N2B | 8825 | 26698;26699;26700 | chr2:178605627;178605626;178605625 | chr2:179470354;179470353;179470352 |
Novex-1 | 8950 | 27073;27074;27075 | chr2:178605627;178605626;178605625 | chr2:179470354;179470353;179470352 |
Novex-2 | 9017 | 27274;27275;27276 | chr2:178605627;178605626;178605625 | chr2:179470354;179470353;179470352 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs756643886 | -0.773 | 0.978 | N | 0.815 | 0.377 | 0.328752806141 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
G/D | rs756643886 | -0.773 | 0.978 | N | 0.815 | 0.377 | 0.328752806141 | gnomAD-4.0.0 | 7.53421E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00259E-07 | 1.04517E-04 | 1.65893E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9246 | likely_pathogenic | 0.9004 | pathogenic | -0.334 | Destabilizing | 0.961 | D | 0.731 | prob.delet. | N | 0.475140993 | None | None | I |
G/C | 0.9725 | likely_pathogenic | 0.9651 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.528581612 | None | None | I |
G/D | 0.9935 | likely_pathogenic | 0.9909 | pathogenic | -0.663 | Destabilizing | 0.978 | D | 0.815 | deleterious | N | 0.487218087 | None | None | I |
G/E | 0.9963 | likely_pathogenic | 0.9949 | pathogenic | -0.827 | Destabilizing | 0.991 | D | 0.875 | deleterious | None | None | None | None | I |
G/F | 0.9957 | likely_pathogenic | 0.9952 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
G/H | 0.9955 | likely_pathogenic | 0.9944 | pathogenic | -0.628 | Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | I |
G/I | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | I |
G/K | 0.9965 | likely_pathogenic | 0.9959 | pathogenic | -0.782 | Destabilizing | 0.983 | D | 0.879 | deleterious | None | None | None | None | I |
G/L | 0.9942 | likely_pathogenic | 0.9938 | pathogenic | -0.442 | Destabilizing | 0.991 | D | 0.879 | deleterious | None | None | None | None | I |
G/M | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/N | 0.9899 | likely_pathogenic | 0.9876 | pathogenic | -0.407 | Destabilizing | 0.193 | N | 0.663 | neutral | None | None | None | None | I |
G/P | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -0.372 | Destabilizing | 0.996 | D | 0.897 | deleterious | None | None | None | None | I |
G/Q | 0.994 | likely_pathogenic | 0.9927 | pathogenic | -0.722 | Destabilizing | 0.998 | D | 0.895 | deleterious | None | None | None | None | I |
G/R | 0.986 | likely_pathogenic | 0.983 | pathogenic | -0.326 | Destabilizing | 0.989 | D | 0.89 | deleterious | N | 0.47924237 | None | None | I |
G/S | 0.9228 | likely_pathogenic | 0.8894 | pathogenic | -0.557 | Destabilizing | 0.978 | D | 0.787 | deleterious | N | 0.474785372 | None | None | I |
G/T | 0.99 | likely_pathogenic | 0.9856 | pathogenic | -0.652 | Destabilizing | 0.991 | D | 0.865 | deleterious | None | None | None | None | I |
G/V | 0.9944 | likely_pathogenic | 0.9925 | pathogenic | -0.372 | Destabilizing | 0.994 | D | 0.881 | deleterious | N | 0.494094622 | None | None | I |
G/W | 0.9916 | likely_pathogenic | 0.9905 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
G/Y | 0.9942 | likely_pathogenic | 0.9921 | pathogenic | -0.894 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.