Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17900 | 53923;53924;53925 | chr2:178605597;178605596;178605595 | chr2:179470324;179470323;179470322 |
N2AB | 16259 | 49000;49001;49002 | chr2:178605597;178605596;178605595 | chr2:179470324;179470323;179470322 |
N2A | 15332 | 46219;46220;46221 | chr2:178605597;178605596;178605595 | chr2:179470324;179470323;179470322 |
N2B | 8835 | 26728;26729;26730 | chr2:178605597;178605596;178605595 | chr2:179470324;179470323;179470322 |
Novex-1 | 8960 | 27103;27104;27105 | chr2:178605597;178605596;178605595 | chr2:179470324;179470323;179470322 |
Novex-2 | 9027 | 27304;27305;27306 | chr2:178605597;178605596;178605595 | chr2:179470324;179470323;179470322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1231539821 | None | 0.997 | N | 0.777 | 0.218 | 0.276898752692 | gnomAD-3.1.2 | 6.63E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.48E-05 | 0 | 0 |
E/Q | rs1231539821 | None | 0.997 | N | 0.777 | 0.218 | 0.276898752692 | gnomAD-4.0.0 | 6.6306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47658E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9367 | likely_pathogenic | 0.9158 | pathogenic | -1.313 | Destabilizing | 0.977 | D | 0.687 | prob.neutral | N | 0.51807468 | None | None | N |
E/C | 0.987 | likely_pathogenic | 0.986 | pathogenic | -0.697 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.7241 | likely_pathogenic | 0.6505 | pathogenic | -1.842 | Destabilizing | 0.117 | N | 0.379 | neutral | N | 0.471586275 | None | None | N |
E/F | 0.9914 | likely_pathogenic | 0.9906 | pathogenic | -0.905 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/G | 0.9579 | likely_pathogenic | 0.9417 | pathogenic | -1.721 | Destabilizing | 0.993 | D | 0.734 | prob.delet. | N | 0.513101158 | None | None | N |
E/H | 0.9769 | likely_pathogenic | 0.9677 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/I | 0.9727 | likely_pathogenic | 0.9683 | pathogenic | -0.143 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
E/K | 0.9578 | likely_pathogenic | 0.9382 | pathogenic | -1.5 | Destabilizing | 0.977 | D | 0.677 | prob.neutral | N | 0.47730704 | None | None | N |
E/L | 0.9712 | likely_pathogenic | 0.9658 | pathogenic | -0.143 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
E/M | 0.9717 | likely_pathogenic | 0.9657 | pathogenic | 0.554 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/N | 0.9727 | likely_pathogenic | 0.9618 | pathogenic | -1.802 | Destabilizing | 0.99 | D | 0.794 | deleterious | None | None | None | None | N |
E/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.518 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
E/Q | 0.7256 | likely_pathogenic | 0.6608 | pathogenic | -1.5 | Destabilizing | 0.997 | D | 0.777 | deleterious | N | 0.51222762 | None | None | N |
E/R | 0.965 | likely_pathogenic | 0.9518 | pathogenic | -1.315 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
E/S | 0.9311 | likely_pathogenic | 0.8986 | pathogenic | -2.385 | Highly Destabilizing | 0.983 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/T | 0.9563 | likely_pathogenic | 0.9394 | pathogenic | -2.005 | Highly Destabilizing | 0.995 | D | 0.78 | deleterious | None | None | None | None | N |
E/V | 0.9345 | likely_pathogenic | 0.9215 | pathogenic | -0.518 | Destabilizing | 0.997 | D | 0.78 | deleterious | N | 0.498097548 | None | None | N |
E/W | 0.9935 | likely_pathogenic | 0.9916 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/Y | 0.984 | likely_pathogenic | 0.9801 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.