Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17901 | 53926;53927;53928 | chr2:178605594;178605593;178605592 | chr2:179470321;179470320;179470319 |
N2AB | 16260 | 49003;49004;49005 | chr2:178605594;178605593;178605592 | chr2:179470321;179470320;179470319 |
N2A | 15333 | 46222;46223;46224 | chr2:178605594;178605593;178605592 | chr2:179470321;179470320;179470319 |
N2B | 8836 | 26731;26732;26733 | chr2:178605594;178605593;178605592 | chr2:179470321;179470320;179470319 |
Novex-1 | 8961 | 27106;27107;27108 | chr2:178605594;178605593;178605592 | chr2:179470321;179470320;179470319 |
Novex-2 | 9028 | 27307;27308;27309 | chr2:178605594;178605593;178605592 | chr2:179470321;179470320;179470319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.085 | N | 0.449 | 0.17 | 0.177238962908 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/T | None | None | 0.978 | N | 0.771 | 0.446 | 0.352910780287 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7754 | likely_pathogenic | 0.8168 | pathogenic | -1.388 | Destabilizing | 0.944 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/C | 0.6685 | likely_pathogenic | 0.7394 | pathogenic | -1.475 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
K/D | 0.9872 | likely_pathogenic | 0.9913 | pathogenic | -2.212 | Highly Destabilizing | 0.968 | D | 0.756 | deleterious | None | None | None | None | N |
K/E | 0.7678 | likely_pathogenic | 0.8133 | pathogenic | -1.885 | Destabilizing | 0.928 | D | 0.689 | prob.neutral | N | 0.48882793 | None | None | N |
K/F | 0.8942 | likely_pathogenic | 0.9163 | pathogenic | -0.605 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
K/G | 0.8713 | likely_pathogenic | 0.9136 | pathogenic | -1.889 | Destabilizing | 0.895 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/H | 0.6169 | likely_pathogenic | 0.6521 | pathogenic | -1.612 | Destabilizing | 0.996 | D | 0.802 | deleterious | None | None | None | None | N |
K/I | 0.6811 | likely_pathogenic | 0.7478 | pathogenic | 0.052 | Stabilizing | 0.989 | D | 0.85 | deleterious | N | 0.497988886 | None | None | N |
K/L | 0.6371 | likely_pathogenic | 0.7087 | pathogenic | 0.052 | Stabilizing | 0.992 | D | 0.775 | deleterious | None | None | None | None | N |
K/M | 0.3149 | likely_benign | 0.3631 | ambiguous | -0.33 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
K/N | 0.9311 | likely_pathogenic | 0.9477 | pathogenic | -2.023 | Highly Destabilizing | 0.085 | N | 0.449 | neutral | N | 0.506932185 | None | None | N |
K/P | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -0.409 | Destabilizing | 0.992 | D | 0.819 | deleterious | None | None | None | None | N |
K/Q | 0.2876 | likely_benign | 0.3205 | benign | -1.605 | Destabilizing | 0.978 | D | 0.801 | deleterious | N | 0.467431992 | None | None | N |
K/R | 0.1165 | likely_benign | 0.1187 | benign | -0.929 | Destabilizing | 0.928 | D | 0.705 | prob.neutral | N | 0.474709382 | None | None | N |
K/S | 0.8566 | likely_pathogenic | 0.8816 | pathogenic | -2.503 | Highly Destabilizing | 0.895 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/T | 0.5994 | likely_pathogenic | 0.6985 | pathogenic | -1.907 | Destabilizing | 0.978 | D | 0.771 | deleterious | N | 0.513054339 | None | None | N |
K/V | 0.5768 | likely_pathogenic | 0.6566 | pathogenic | -0.409 | Destabilizing | 0.992 | D | 0.805 | deleterious | None | None | None | None | N |
K/W | 0.8932 | likely_pathogenic | 0.9147 | pathogenic | -0.699 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
K/Y | 0.7351 | likely_pathogenic | 0.7589 | pathogenic | -0.343 | Destabilizing | 0.997 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.