Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17909 | 53950;53951;53952 | chr2:178605570;178605569;178605568 | chr2:179470297;179470296;179470295 |
N2AB | 16268 | 49027;49028;49029 | chr2:178605570;178605569;178605568 | chr2:179470297;179470296;179470295 |
N2A | 15341 | 46246;46247;46248 | chr2:178605570;178605569;178605568 | chr2:179470297;179470296;179470295 |
N2B | 8844 | 26755;26756;26757 | chr2:178605570;178605569;178605568 | chr2:179470297;179470296;179470295 |
Novex-1 | 8969 | 27130;27131;27132 | chr2:178605570;178605569;178605568 | chr2:179470297;179470296;179470295 |
Novex-2 | 9036 | 27331;27332;27333 | chr2:178605570;178605569;178605568 | chr2:179470297;179470296;179470295 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1328997528 | -1.459 | 0.949 | N | 0.595 | 0.273 | 0.609492077976 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
F/S | rs1328997528 | -1.459 | 0.949 | N | 0.595 | 0.273 | 0.609492077976 | gnomAD-4.0.0 | 1.59435E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86512E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9656 | likely_pathogenic | 0.9486 | pathogenic | -2.485 | Highly Destabilizing | 0.775 | D | 0.574 | neutral | None | None | None | None | N |
F/C | 0.9257 | likely_pathogenic | 0.8701 | pathogenic | -1.128 | Destabilizing | 0.995 | D | 0.663 | neutral | N | 0.491013068 | None | None | N |
F/D | 0.9779 | likely_pathogenic | 0.9669 | pathogenic | -1.576 | Destabilizing | 0.987 | D | 0.673 | neutral | None | None | None | None | N |
F/E | 0.99 | likely_pathogenic | 0.9879 | pathogenic | -1.528 | Destabilizing | 0.961 | D | 0.666 | neutral | None | None | None | None | N |
F/G | 0.9782 | likely_pathogenic | 0.9691 | pathogenic | -2.783 | Highly Destabilizing | 0.923 | D | 0.584 | neutral | None | None | None | None | N |
F/H | 0.8984 | likely_pathogenic | 0.8506 | pathogenic | -1.02 | Destabilizing | 0.923 | D | 0.617 | neutral | None | None | None | None | N |
F/I | 0.8911 | likely_pathogenic | 0.8339 | pathogenic | -1.59 | Destabilizing | 0.901 | D | 0.536 | neutral | N | 0.466107957 | None | None | N |
F/K | 0.9933 | likely_pathogenic | 0.9911 | pathogenic | -1.151 | Destabilizing | 0.961 | D | 0.671 | neutral | None | None | None | None | N |
F/L | 0.9841 | likely_pathogenic | 0.9781 | pathogenic | -1.59 | Destabilizing | 0.565 | D | 0.546 | neutral | N | 0.512126046 | None | None | N |
F/M | 0.9321 | likely_pathogenic | 0.908 | pathogenic | -1.182 | Destabilizing | 0.987 | D | 0.569 | neutral | None | None | None | None | N |
F/N | 0.9546 | likely_pathogenic | 0.9296 | pathogenic | -1.097 | Destabilizing | 0.961 | D | 0.675 | neutral | None | None | None | None | N |
F/P | 0.9892 | likely_pathogenic | 0.983 | pathogenic | -1.882 | Destabilizing | 0.987 | D | 0.67 | neutral | None | None | None | None | N |
F/Q | 0.9859 | likely_pathogenic | 0.9837 | pathogenic | -1.336 | Destabilizing | 0.987 | D | 0.675 | neutral | None | None | None | None | N |
F/R | 0.9857 | likely_pathogenic | 0.9825 | pathogenic | -0.327 | Destabilizing | 0.961 | D | 0.673 | neutral | None | None | None | None | N |
F/S | 0.933 | likely_pathogenic | 0.8986 | pathogenic | -1.839 | Destabilizing | 0.949 | D | 0.595 | neutral | N | 0.477717752 | None | None | N |
F/T | 0.9582 | likely_pathogenic | 0.9302 | pathogenic | -1.707 | Destabilizing | 0.961 | D | 0.592 | neutral | None | None | None | None | N |
F/V | 0.8823 | likely_pathogenic | 0.8274 | pathogenic | -1.882 | Destabilizing | 0.722 | D | 0.534 | neutral | N | 0.461726637 | None | None | N |
F/W | 0.386 | ambiguous | 0.3398 | benign | -0.781 | Destabilizing | 0.024 | N | 0.305 | neutral | None | None | None | None | N |
F/Y | 0.1962 | likely_benign | 0.1429 | benign | -0.925 | Destabilizing | 0.003 | N | 0.223 | neutral | N | 0.463065449 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.