Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17910 | 53953;53954;53955 | chr2:178605567;178605566;178605565 | chr2:179470294;179470293;179470292 |
N2AB | 16269 | 49030;49031;49032 | chr2:178605567;178605566;178605565 | chr2:179470294;179470293;179470292 |
N2A | 15342 | 46249;46250;46251 | chr2:178605567;178605566;178605565 | chr2:179470294;179470293;179470292 |
N2B | 8845 | 26758;26759;26760 | chr2:178605567;178605566;178605565 | chr2:179470294;179470293;179470292 |
Novex-1 | 8970 | 27133;27134;27135 | chr2:178605567;178605566;178605565 | chr2:179470294;179470293;179470292 |
Novex-2 | 9037 | 27334;27335;27336 | chr2:178605567;178605566;178605565 | chr2:179470294;179470293;179470292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs966575531 | None | 0.294 | N | 0.246 | 0.186 | 0.229264304666 | gnomAD-4.0.0 | 2.10121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.83163E-06 | 0 | 1.71697E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1998 | likely_benign | 0.2192 | benign | -0.728 | Destabilizing | 0.698 | D | 0.555 | neutral | N | 0.483328865 | None | None | N |
E/C | 0.7172 | likely_pathogenic | 0.7464 | pathogenic | -0.472 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/D | 0.1567 | likely_benign | 0.1759 | benign | -0.863 | Destabilizing | 0.014 | N | 0.216 | neutral | N | 0.456990413 | None | None | N |
E/F | 0.6644 | likely_pathogenic | 0.6971 | pathogenic | -0.079 | Destabilizing | 0.956 | D | 0.641 | neutral | None | None | None | None | N |
E/G | 0.3285 | likely_benign | 0.352 | ambiguous | -1.057 | Destabilizing | 0.904 | D | 0.517 | neutral | N | 0.520193742 | None | None | N |
E/H | 0.3689 | ambiguous | 0.3909 | ambiguous | -0.043 | Destabilizing | 0.994 | D | 0.573 | neutral | None | None | None | None | N |
E/I | 0.196 | likely_benign | 0.2005 | benign | 0.16 | Stabilizing | 0.915 | D | 0.581 | neutral | None | None | None | None | N |
E/K | 0.2052 | likely_benign | 0.2028 | benign | -0.339 | Destabilizing | 0.698 | D | 0.576 | neutral | N | 0.461222797 | None | None | N |
E/L | 0.2954 | likely_benign | 0.3155 | benign | 0.16 | Stabilizing | 0.754 | D | 0.534 | neutral | None | None | None | None | N |
E/M | 0.3729 | ambiguous | 0.3982 | ambiguous | 0.355 | Stabilizing | 0.994 | D | 0.627 | neutral | None | None | None | None | N |
E/N | 0.3166 | likely_benign | 0.3397 | benign | -0.925 | Destabilizing | 0.956 | D | 0.526 | neutral | None | None | None | None | N |
E/P | 0.9192 | likely_pathogenic | 0.9191 | pathogenic | -0.115 | Destabilizing | 0.993 | D | 0.588 | neutral | None | None | None | None | N |
E/Q | 0.1188 | likely_benign | 0.1217 | benign | -0.806 | Destabilizing | 0.294 | N | 0.246 | neutral | N | 0.429689168 | None | None | N |
E/R | 0.2989 | likely_benign | 0.3048 | benign | 0.072 | Stabilizing | 0.956 | D | 0.555 | neutral | None | None | None | None | N |
E/S | 0.2187 | likely_benign | 0.2306 | benign | -1.154 | Destabilizing | 0.86 | D | 0.543 | neutral | None | None | None | None | N |
E/T | 0.1815 | likely_benign | 0.1929 | benign | -0.879 | Destabilizing | 0.86 | D | 0.523 | neutral | None | None | None | None | N |
E/V | 0.1279 | likely_benign | 0.1309 | benign | -0.115 | Destabilizing | 0.032 | N | 0.351 | neutral | N | 0.447600138 | None | None | N |
E/W | 0.8703 | likely_pathogenic | 0.8729 | pathogenic | 0.221 | Stabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.5824 | likely_pathogenic | 0.599 | pathogenic | 0.187 | Stabilizing | 0.978 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.