Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17912 | 53959;53960;53961 | chr2:178605561;178605560;178605559 | chr2:179470288;179470287;179470286 |
N2AB | 16271 | 49036;49037;49038 | chr2:178605561;178605560;178605559 | chr2:179470288;179470287;179470286 |
N2A | 15344 | 46255;46256;46257 | chr2:178605561;178605560;178605559 | chr2:179470288;179470287;179470286 |
N2B | 8847 | 26764;26765;26766 | chr2:178605561;178605560;178605559 | chr2:179470288;179470287;179470286 |
Novex-1 | 8972 | 27139;27140;27141 | chr2:178605561;178605560;178605559 | chr2:179470288;179470287;179470286 |
Novex-2 | 9039 | 27340;27341;27342 | chr2:178605561;178605560;178605559 | chr2:179470288;179470287;179470286 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.032 | D | 0.382 | 0.243 | 0.389126455913 | gnomAD-4.0.0 | 4.98543E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.62515E-05 | 0 | 3.71477E-06 | 0 | 0 |
V/L | None | None | 0.489 | N | 0.527 | 0.132 | 0.273938319068 | gnomAD-4.0.0 | 7.12155E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.28645E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2121 | likely_benign | 0.2583 | benign | -1.59 | Destabilizing | 0.489 | N | 0.532 | neutral | N | 0.448850932 | None | None | N |
V/C | 0.6074 | likely_pathogenic | 0.6219 | pathogenic | -1.046 | Destabilizing | 0.019 | N | 0.402 | neutral | None | None | None | None | N |
V/D | 0.8408 | likely_pathogenic | 0.8839 | pathogenic | -1.705 | Destabilizing | 0.99 | D | 0.742 | deleterious | N | 0.492777949 | None | None | N |
V/E | 0.7068 | likely_pathogenic | 0.759 | pathogenic | -1.574 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/F | 0.4042 | ambiguous | 0.4971 | ambiguous | -1.006 | Destabilizing | 0.032 | N | 0.382 | neutral | D | 0.522079254 | None | None | N |
V/G | 0.4328 | ambiguous | 0.5092 | ambiguous | -2.036 | Highly Destabilizing | 0.97 | D | 0.697 | prob.neutral | N | 0.485398116 | None | None | N |
V/H | 0.8769 | likely_pathogenic | 0.9109 | pathogenic | -1.661 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
V/I | 0.0936 | likely_benign | 0.0977 | benign | -0.407 | Destabilizing | 0.489 | N | 0.555 | neutral | N | 0.493641859 | None | None | N |
V/K | 0.8552 | likely_pathogenic | 0.8882 | pathogenic | -1.374 | Destabilizing | 0.978 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/L | 0.3107 | likely_benign | 0.3969 | ambiguous | -0.407 | Destabilizing | 0.489 | N | 0.527 | neutral | N | 0.478653764 | None | None | N |
V/M | 0.3046 | likely_benign | 0.3688 | ambiguous | -0.332 | Destabilizing | 0.978 | D | 0.579 | neutral | None | None | None | None | N |
V/N | 0.7258 | likely_pathogenic | 0.774 | pathogenic | -1.469 | Destabilizing | 0.993 | D | 0.746 | deleterious | None | None | None | None | N |
V/P | 0.896 | likely_pathogenic | 0.9072 | pathogenic | -0.769 | Destabilizing | 0.993 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/Q | 0.7357 | likely_pathogenic | 0.7818 | pathogenic | -1.434 | Destabilizing | 0.993 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/R | 0.8218 | likely_pathogenic | 0.8596 | pathogenic | -1.07 | Destabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | N |
V/S | 0.464 | ambiguous | 0.5271 | ambiguous | -2.053 | Highly Destabilizing | 0.956 | D | 0.672 | neutral | None | None | None | None | N |
V/T | 0.3564 | ambiguous | 0.4116 | ambiguous | -1.786 | Destabilizing | 0.86 | D | 0.539 | neutral | None | None | None | None | N |
V/W | 0.946 | likely_pathogenic | 0.9656 | pathogenic | -1.409 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/Y | 0.8046 | likely_pathogenic | 0.8496 | pathogenic | -1.004 | Destabilizing | 0.915 | D | 0.676 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.