Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17913 | 53962;53963;53964 | chr2:178605558;178605557;178605556 | chr2:179470285;179470284;179470283 |
N2AB | 16272 | 49039;49040;49041 | chr2:178605558;178605557;178605556 | chr2:179470285;179470284;179470283 |
N2A | 15345 | 46258;46259;46260 | chr2:178605558;178605557;178605556 | chr2:179470285;179470284;179470283 |
N2B | 8848 | 26767;26768;26769 | chr2:178605558;178605557;178605556 | chr2:179470285;179470284;179470283 |
Novex-1 | 8973 | 27142;27143;27144 | chr2:178605558;178605557;178605556 | chr2:179470285;179470284;179470283 |
Novex-2 | 9040 | 27343;27344;27345 | chr2:178605558;178605557;178605556 | chr2:179470285;179470284;179470283 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 1.0 | N | 0.787 | 0.475 | 0.50539470866 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8269 | likely_pathogenic | 0.7871 | pathogenic | -0.979 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/C | 0.5941 | likely_pathogenic | 0.5757 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
N/D | 0.8093 | likely_pathogenic | 0.7521 | pathogenic | -0.636 | Destabilizing | 0.999 | D | 0.636 | neutral | N | 0.518884234 | None | None | N |
N/E | 0.9457 | likely_pathogenic | 0.9363 | pathogenic | -0.45 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/F | 0.9759 | likely_pathogenic | 0.977 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
N/G | 0.702 | likely_pathogenic | 0.6826 | pathogenic | -1.382 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
N/H | 0.6661 | likely_pathogenic | 0.5581 | ambiguous | -0.819 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.519825596 | None | None | N |
N/I | 0.9166 | likely_pathogenic | 0.8869 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.787 | deleterious | N | 0.473521605 | None | None | N |
N/K | 0.9855 | likely_pathogenic | 0.9771 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.469861074 | None | None | N |
N/L | 0.8619 | likely_pathogenic | 0.8644 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/M | 0.8793 | likely_pathogenic | 0.8968 | pathogenic | 0.369 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/P | 0.9581 | likely_pathogenic | 0.9351 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/Q | 0.9217 | likely_pathogenic | 0.9021 | pathogenic | -0.657 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
N/R | 0.9738 | likely_pathogenic | 0.963 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
N/S | 0.2141 | likely_benign | 0.1803 | benign | -1.008 | Destabilizing | 0.999 | D | 0.596 | neutral | N | 0.504837501 | None | None | N |
N/T | 0.5019 | ambiguous | 0.4717 | ambiguous | -0.601 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.499719683 | None | None | N |
N/V | 0.8566 | likely_pathogenic | 0.844 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
N/W | 0.9865 | likely_pathogenic | 0.9865 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/Y | 0.8739 | likely_pathogenic | 0.8538 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.520308386 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.