Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17914 | 53965;53966;53967 | chr2:178605555;178605554;178605553 | chr2:179470282;179470281;179470280 |
N2AB | 16273 | 49042;49043;49044 | chr2:178605555;178605554;178605553 | chr2:179470282;179470281;179470280 |
N2A | 15346 | 46261;46262;46263 | chr2:178605555;178605554;178605553 | chr2:179470282;179470281;179470280 |
N2B | 8849 | 26770;26771;26772 | chr2:178605555;178605554;178605553 | chr2:179470282;179470281;179470280 |
Novex-1 | 8974 | 27145;27146;27147 | chr2:178605555;178605554;178605553 | chr2:179470282;179470281;179470280 |
Novex-2 | 9041 | 27346;27347;27348 | chr2:178605555;178605554;178605553 | chr2:179470282;179470281;179470280 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | None | N | 0.17 | 0.114 | 0.0551355673512 | gnomAD-4.0.0 | 2.76429E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.56753E-05 | None | 1.98523E-05 | 0 | 1.81267E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1665 | likely_benign | 0.2029 | benign | 0.054 | Stabilizing | None | N | 0.157 | neutral | None | None | None | None | N |
K/C | 0.5342 | ambiguous | 0.5976 | pathogenic | -0.333 | Destabilizing | 0.676 | D | 0.237 | neutral | None | None | None | None | N |
K/D | 0.2049 | likely_benign | 0.244 | benign | -0.151 | Destabilizing | 0.072 | N | 0.382 | neutral | None | None | None | None | N |
K/E | 0.0965 | likely_benign | 0.1068 | benign | -0.163 | Destabilizing | 0.012 | N | 0.329 | neutral | N | 0.456584981 | None | None | N |
K/F | 0.6039 | likely_pathogenic | 0.6533 | pathogenic | -0.276 | Destabilizing | 0.356 | N | 0.278 | neutral | None | None | None | None | N |
K/G | 0.1912 | likely_benign | 0.2297 | benign | -0.082 | Destabilizing | 0.016 | N | 0.341 | neutral | None | None | None | None | N |
K/H | 0.1995 | likely_benign | 0.2207 | benign | -0.216 | Destabilizing | 0.214 | N | 0.274 | neutral | None | None | None | None | N |
K/I | 0.296 | likely_benign | 0.3361 | benign | 0.329 | Stabilizing | 0.214 | N | 0.345 | neutral | None | None | None | None | N |
K/L | 0.2448 | likely_benign | 0.2774 | benign | 0.329 | Stabilizing | 0.016 | N | 0.357 | neutral | None | None | None | None | N |
K/M | 0.2081 | likely_benign | 0.2342 | benign | 0.006 | Stabilizing | 0.295 | N | 0.275 | neutral | N | 0.518404231 | None | None | N |
K/N | 0.1916 | likely_benign | 0.2178 | benign | 0.139 | Stabilizing | 0.055 | N | 0.31 | neutral | N | 0.502069341 | None | None | N |
K/P | 0.2436 | likely_benign | 0.2281 | benign | 0.261 | Stabilizing | None | N | 0.172 | neutral | None | None | None | None | N |
K/Q | 0.09 | likely_benign | 0.0996 | benign | -0.01 | Destabilizing | None | N | 0.225 | neutral | N | 0.484000869 | None | None | N |
K/R | 0.081 | likely_benign | 0.0868 | benign | -0.03 | Destabilizing | 0.029 | N | 0.334 | neutral | N | 0.431899967 | None | None | N |
K/S | 0.1707 | likely_benign | 0.1961 | benign | -0.251 | Destabilizing | 0.016 | N | 0.302 | neutral | None | None | None | None | N |
K/T | 0.1056 | likely_benign | 0.1129 | benign | -0.142 | Destabilizing | None | N | 0.17 | neutral | N | 0.428822377 | None | None | N |
K/V | 0.2377 | likely_benign | 0.2722 | benign | 0.261 | Stabilizing | 0.038 | N | 0.355 | neutral | None | None | None | None | N |
K/W | 0.6002 | likely_pathogenic | 0.6466 | pathogenic | -0.37 | Destabilizing | 0.864 | D | 0.239 | neutral | None | None | None | None | N |
K/Y | 0.4423 | ambiguous | 0.4946 | ambiguous | -0.01 | Destabilizing | 0.356 | N | 0.293 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.