Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC17925599;5600;5601 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215
N2AB17925599;5600;5601 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215
N2A17925599;5600;5601 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215
N2B17465461;5462;5463 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215
Novex-117465461;5462;5463 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215
Novex-217465461;5462;5463 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215
Novex-317925599;5600;5601 chr2:178776490;178776489;178776488chr2:179641217;179641216;179641215

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-8
  • Domain position: 90
  • Structural Position: 174
  • Q(SASA): 0.0946
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P None None 1.0 D 0.902 0.937 0.93403665911 gnomAD-4.0.0 1.60571E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85675E-06 0 0
L/R None None 1.0 D 0.921 0.842 0.923557122293 gnomAD-4.0.0 1.60571E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85675E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9792 likely_pathogenic 0.9675 pathogenic -2.941 Highly Destabilizing 0.999 D 0.787 deleterious None None None None N
L/C 0.969 likely_pathogenic 0.9585 pathogenic -2.302 Highly Destabilizing 1.0 D 0.882 deleterious None None None None N
L/D 0.9999 likely_pathogenic 0.9998 pathogenic -3.317 Highly Destabilizing 1.0 D 0.904 deleterious None None None None N
L/E 0.999 likely_pathogenic 0.9986 pathogenic -3.013 Highly Destabilizing 1.0 D 0.904 deleterious None None None None N
L/F 0.7859 likely_pathogenic 0.7694 pathogenic -1.815 Destabilizing 1.0 D 0.831 deleterious D 0.782101842 None None N
L/G 0.9976 likely_pathogenic 0.9967 pathogenic -3.571 Highly Destabilizing 1.0 D 0.899 deleterious None None None None N
L/H 0.9968 likely_pathogenic 0.996 pathogenic -3.102 Highly Destabilizing 1.0 D 0.894 deleterious D 0.813246651 None None N
L/I 0.3365 likely_benign 0.2906 benign -1.065 Destabilizing 0.999 D 0.583 neutral D 0.591085076 None None N
L/K 0.9983 likely_pathogenic 0.9976 pathogenic -2.293 Highly Destabilizing 1.0 D 0.921 deleterious None None None None N
L/M 0.4296 ambiguous 0.3844 ambiguous -1.113 Destabilizing 1.0 D 0.805 deleterious None None None None N
L/N 0.9988 likely_pathogenic 0.9984 pathogenic -2.875 Highly Destabilizing 1.0 D 0.903 deleterious None None None None N
L/P 0.9995 likely_pathogenic 0.9993 pathogenic -1.677 Destabilizing 1.0 D 0.902 deleterious D 0.813246651 None None N
L/Q 0.9953 likely_pathogenic 0.9932 pathogenic -2.586 Highly Destabilizing 1.0 D 0.917 deleterious None None None None N
L/R 0.9958 likely_pathogenic 0.9939 pathogenic -2.184 Highly Destabilizing 1.0 D 0.921 deleterious D 0.813246651 None None N
L/S 0.9979 likely_pathogenic 0.9968 pathogenic -3.603 Highly Destabilizing 1.0 D 0.92 deleterious None None None None N
L/T 0.9905 likely_pathogenic 0.9847 pathogenic -3.126 Highly Destabilizing 1.0 D 0.861 deleterious None None None None N
L/V 0.3875 ambiguous 0.3106 benign -1.677 Destabilizing 0.999 D 0.583 neutral D 0.632431407 None None N
L/W 0.9885 likely_pathogenic 0.9868 pathogenic -2.214 Highly Destabilizing 1.0 D 0.894 deleterious None None None None N
L/Y 0.9865 likely_pathogenic 0.9854 pathogenic -1.979 Destabilizing 1.0 D 0.891 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.