Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1792 | 5599;5600;5601 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
N2AB | 1792 | 5599;5600;5601 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
N2A | 1792 | 5599;5600;5601 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
N2B | 1746 | 5461;5462;5463 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
Novex-1 | 1746 | 5461;5462;5463 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
Novex-2 | 1746 | 5461;5462;5463 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
Novex-3 | 1792 | 5599;5600;5601 | chr2:178776490;178776489;178776488 | chr2:179641217;179641216;179641215 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.902 | 0.937 | 0.93403665911 | gnomAD-4.0.0 | 1.60571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85675E-06 | 0 | 0 |
L/R | None | None | 1.0 | D | 0.921 | 0.842 | 0.923557122293 | gnomAD-4.0.0 | 1.60571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85675E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9792 | likely_pathogenic | 0.9675 | pathogenic | -2.941 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
L/C | 0.969 | likely_pathogenic | 0.9585 | pathogenic | -2.302 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -3.317 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/E | 0.999 | likely_pathogenic | 0.9986 | pathogenic | -3.013 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/F | 0.7859 | likely_pathogenic | 0.7694 | pathogenic | -1.815 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.782101842 | None | None | N |
L/G | 0.9976 | likely_pathogenic | 0.9967 | pathogenic | -3.571 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/H | 0.9968 | likely_pathogenic | 0.996 | pathogenic | -3.102 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.813246651 | None | None | N |
L/I | 0.3365 | likely_benign | 0.2906 | benign | -1.065 | Destabilizing | 0.999 | D | 0.583 | neutral | D | 0.591085076 | None | None | N |
L/K | 0.9983 | likely_pathogenic | 0.9976 | pathogenic | -2.293 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/M | 0.4296 | ambiguous | 0.3844 | ambiguous | -1.113 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/N | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -2.875 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/P | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.677 | Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.813246651 | None | None | N |
L/Q | 0.9953 | likely_pathogenic | 0.9932 | pathogenic | -2.586 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/R | 0.9958 | likely_pathogenic | 0.9939 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.813246651 | None | None | N |
L/S | 0.9979 | likely_pathogenic | 0.9968 | pathogenic | -3.603 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/T | 0.9905 | likely_pathogenic | 0.9847 | pathogenic | -3.126 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/V | 0.3875 | ambiguous | 0.3106 | benign | -1.677 | Destabilizing | 0.999 | D | 0.583 | neutral | D | 0.632431407 | None | None | N |
L/W | 0.9885 | likely_pathogenic | 0.9868 | pathogenic | -2.214 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/Y | 0.9865 | likely_pathogenic | 0.9854 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.