Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17926 | 54001;54002;54003 | chr2:178605519;178605518;178605517 | chr2:179470246;179470245;179470244 |
N2AB | 16285 | 49078;49079;49080 | chr2:178605519;178605518;178605517 | chr2:179470246;179470245;179470244 |
N2A | 15358 | 46297;46298;46299 | chr2:178605519;178605518;178605517 | chr2:179470246;179470245;179470244 |
N2B | 8861 | 26806;26807;26808 | chr2:178605519;178605518;178605517 | chr2:179470246;179470245;179470244 |
Novex-1 | 8986 | 27181;27182;27183 | chr2:178605519;178605518;178605517 | chr2:179470246;179470245;179470244 |
Novex-2 | 9053 | 27382;27383;27384 | chr2:178605519;178605518;178605517 | chr2:179470246;179470245;179470244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.177 | 0.073 | 0.107399877778 | gnomAD-4.0.0 | 1.59431E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43476E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1856 | likely_benign | 0.2093 | benign | -0.161 | Destabilizing | 0.016 | N | 0.32 | neutral | None | None | None | None | N |
N/C | 0.3174 | likely_benign | 0.3433 | ambiguous | 0.299 | Stabilizing | 0.864 | D | 0.397 | neutral | None | None | None | None | N |
N/D | 0.0805 | likely_benign | 0.0925 | benign | 0.152 | Stabilizing | None | N | 0.177 | neutral | N | 0.473303873 | None | None | N |
N/E | 0.2232 | likely_benign | 0.247 | benign | 0.1 | Stabilizing | 0.016 | N | 0.321 | neutral | None | None | None | None | N |
N/F | 0.4335 | ambiguous | 0.5005 | ambiguous | -0.667 | Destabilizing | 0.628 | D | 0.432 | neutral | None | None | None | None | N |
N/G | 0.1592 | likely_benign | 0.1667 | benign | -0.29 | Destabilizing | None | N | 0.152 | neutral | None | None | None | None | N |
N/H | 0.1183 | likely_benign | 0.1222 | benign | -0.312 | Destabilizing | 0.295 | N | 0.392 | neutral | N | 0.479032241 | None | None | N |
N/I | 0.3048 | likely_benign | 0.3582 | ambiguous | 0.082 | Stabilizing | 0.295 | N | 0.45 | neutral | N | 0.491149015 | None | None | N |
N/K | 0.205 | likely_benign | 0.1942 | benign | 0.163 | Stabilizing | None | N | 0.154 | neutral | N | 0.488660114 | None | None | N |
N/L | 0.2883 | likely_benign | 0.3193 | benign | 0.082 | Stabilizing | 0.072 | N | 0.461 | neutral | None | None | None | None | N |
N/M | 0.3087 | likely_benign | 0.3325 | benign | 0.248 | Stabilizing | 0.864 | D | 0.377 | neutral | None | None | None | None | N |
N/P | 0.6814 | likely_pathogenic | 0.7161 | pathogenic | 0.026 | Stabilizing | 0.356 | N | 0.441 | neutral | None | None | None | None | N |
N/Q | 0.227 | likely_benign | 0.2324 | benign | -0.214 | Destabilizing | 0.072 | N | 0.383 | neutral | None | None | None | None | N |
N/R | 0.2968 | likely_benign | 0.3013 | benign | 0.227 | Stabilizing | None | N | 0.214 | neutral | None | None | None | None | N |
N/S | 0.1057 | likely_benign | 0.1156 | benign | 0.01 | Stabilizing | 0.012 | N | 0.369 | neutral | N | 0.50580308 | None | None | N |
N/T | 0.144 | likely_benign | 0.1586 | benign | 0.084 | Stabilizing | 0.055 | N | 0.319 | neutral | N | 0.479285731 | None | None | N |
N/V | 0.2726 | likely_benign | 0.3193 | benign | 0.026 | Stabilizing | 0.136 | N | 0.477 | neutral | None | None | None | None | N |
N/W | 0.6828 | likely_pathogenic | 0.7339 | pathogenic | -0.741 | Destabilizing | 0.864 | D | 0.473 | neutral | None | None | None | None | N |
N/Y | 0.1675 | likely_benign | 0.193 | benign | -0.434 | Destabilizing | 0.56 | D | 0.408 | neutral | N | 0.513772721 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.