Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17928 | 54007;54008;54009 | chr2:178605513;178605512;178605511 | chr2:179470240;179470239;179470238 |
N2AB | 16287 | 49084;49085;49086 | chr2:178605513;178605512;178605511 | chr2:179470240;179470239;179470238 |
N2A | 15360 | 46303;46304;46305 | chr2:178605513;178605512;178605511 | chr2:179470240;179470239;179470238 |
N2B | 8863 | 26812;26813;26814 | chr2:178605513;178605512;178605511 | chr2:179470240;179470239;179470238 |
Novex-1 | 8988 | 27187;27188;27189 | chr2:178605513;178605512;178605511 | chr2:179470240;179470239;179470238 |
Novex-2 | 9055 | 27388;27389;27390 | chr2:178605513;178605512;178605511 | chr2:179470240;179470239;179470238 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.669 | N | 0.355 | 0.221 | 0.219573609325 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1182 | likely_benign | 0.1003 | benign | -0.222 | Destabilizing | 0.012 | N | 0.251 | neutral | N | 0.439364657 | None | None | N |
D/C | 0.6024 | likely_pathogenic | 0.533 | ambiguous | -0.068 | Destabilizing | 0.993 | D | 0.507 | neutral | None | None | None | None | N |
D/E | 0.1136 | likely_benign | 0.0963 | benign | -0.535 | Destabilizing | 0.051 | N | 0.133 | neutral | N | 0.403961217 | None | None | N |
D/F | 0.5687 | likely_pathogenic | 0.5136 | ambiguous | 0.431 | Stabilizing | 0.974 | D | 0.484 | neutral | None | None | None | None | N |
D/G | 0.1926 | likely_benign | 0.1795 | benign | -0.595 | Destabilizing | 0.669 | D | 0.355 | neutral | N | 0.515825286 | None | None | N |
D/H | 0.2706 | likely_benign | 0.2252 | benign | 0.332 | Stabilizing | 0.966 | D | 0.399 | neutral | N | 0.452525956 | None | None | N |
D/I | 0.2893 | likely_benign | 0.209 | benign | 0.761 | Stabilizing | 0.949 | D | 0.488 | neutral | None | None | None | None | N |
D/K | 0.2986 | likely_benign | 0.2538 | benign | 0.111 | Stabilizing | 0.728 | D | 0.353 | neutral | None | None | None | None | N |
D/L | 0.2621 | likely_benign | 0.2209 | benign | 0.761 | Stabilizing | 0.842 | D | 0.421 | neutral | None | None | None | None | N |
D/M | 0.4643 | ambiguous | 0.3964 | ambiguous | 0.99 | Stabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
D/N | 0.1262 | likely_benign | 0.1098 | benign | -0.599 | Destabilizing | 0.891 | D | 0.421 | neutral | N | 0.438903297 | None | None | N |
D/P | 0.5064 | ambiguous | 0.5088 | ambiguous | 0.46 | Stabilizing | 0.974 | D | 0.349 | neutral | None | None | None | None | N |
D/Q | 0.241 | likely_benign | 0.2057 | benign | -0.413 | Destabilizing | 0.325 | N | 0.238 | neutral | None | None | None | None | N |
D/R | 0.3579 | ambiguous | 0.3163 | benign | 0.357 | Stabilizing | 0.949 | D | 0.397 | neutral | None | None | None | None | N |
D/S | 0.1178 | likely_benign | 0.0996 | benign | -0.786 | Destabilizing | 0.728 | D | 0.352 | neutral | None | None | None | None | N |
D/T | 0.182 | likely_benign | 0.141 | benign | -0.461 | Destabilizing | 0.842 | D | 0.375 | neutral | None | None | None | None | N |
D/V | 0.1609 | likely_benign | 0.1196 | benign | 0.46 | Stabilizing | 0.669 | D | 0.409 | neutral | N | 0.436575068 | None | None | N |
D/W | 0.8461 | likely_pathogenic | 0.8186 | pathogenic | 0.671 | Stabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | N |
D/Y | 0.287 | likely_benign | 0.257 | benign | 0.726 | Stabilizing | 0.989 | D | 0.486 | neutral | N | 0.486465171 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.