Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17930 | 54013;54014;54015 | chr2:178605507;178605506;178605505 | chr2:179470234;179470233;179470232 |
N2AB | 16289 | 49090;49091;49092 | chr2:178605507;178605506;178605505 | chr2:179470234;179470233;179470232 |
N2A | 15362 | 46309;46310;46311 | chr2:178605507;178605506;178605505 | chr2:179470234;179470233;179470232 |
N2B | 8865 | 26818;26819;26820 | chr2:178605507;178605506;178605505 | chr2:179470234;179470233;179470232 |
Novex-1 | 8990 | 27193;27194;27195 | chr2:178605507;178605506;178605505 | chr2:179470234;179470233;179470232 |
Novex-2 | 9057 | 27394;27395;27396 | chr2:178605507;178605506;178605505 | chr2:179470234;179470233;179470232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs1211145414 | 0.566 | 0.917 | N | 0.415 | 0.169 | 0.193865811164 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
H/Q | rs1211145414 | 0.566 | 0.917 | N | 0.415 | 0.169 | 0.193865811164 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/Q | rs1211145414 | 0.566 | 0.917 | N | 0.415 | 0.169 | 0.193865811164 | gnomAD-4.0.0 | 3.72164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08944E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4103 | ambiguous | 0.3031 | benign | 0.327 | Stabilizing | 0.004 | N | 0.242 | neutral | None | None | None | None | N |
H/C | 0.2893 | likely_benign | 0.2329 | benign | 0.883 | Stabilizing | 0.981 | D | 0.535 | neutral | None | None | None | None | N |
H/D | 0.308 | likely_benign | 0.2479 | benign | -0.131 | Destabilizing | 0.784 | D | 0.51 | neutral | N | 0.357210207 | None | None | N |
H/E | 0.4222 | ambiguous | 0.3318 | benign | -0.094 | Destabilizing | 0.665 | D | 0.351 | neutral | None | None | None | None | N |
H/F | 0.2849 | likely_benign | 0.2394 | benign | 1.115 | Stabilizing | 0.003 | N | 0.201 | neutral | None | None | None | None | N |
H/G | 0.2731 | likely_benign | 0.2163 | benign | 0.022 | Stabilizing | 0.495 | N | 0.492 | neutral | None | None | None | None | N |
H/I | 0.5528 | ambiguous | 0.4493 | ambiguous | 1.116 | Stabilizing | 0.329 | N | 0.538 | neutral | None | None | None | None | N |
H/K | 0.3099 | likely_benign | 0.2441 | benign | 0.246 | Stabilizing | 0.665 | D | 0.483 | neutral | None | None | None | None | N |
H/L | 0.1298 | likely_benign | 0.0971 | benign | 1.116 | Stabilizing | 0.001 | N | 0.267 | neutral | N | 0.408775178 | None | None | N |
H/M | 0.4176 | ambiguous | 0.3269 | benign | 0.849 | Stabilizing | 0.893 | D | 0.535 | neutral | None | None | None | None | N |
H/N | 0.1013 | likely_benign | 0.0811 | benign | 0.266 | Stabilizing | 0.917 | D | 0.371 | neutral | N | 0.343107547 | None | None | N |
H/P | 0.5944 | likely_pathogenic | 0.5555 | ambiguous | 0.878 | Stabilizing | 0.784 | D | 0.575 | neutral | N | 0.496490163 | None | None | N |
H/Q | 0.2499 | likely_benign | 0.1836 | benign | 0.399 | Stabilizing | 0.917 | D | 0.415 | neutral | N | 0.431419965 | None | None | N |
H/R | 0.1912 | likely_benign | 0.1506 | benign | -0.442 | Destabilizing | 0.784 | D | 0.354 | neutral | N | 0.433844194 | None | None | N |
H/S | 0.313 | likely_benign | 0.2395 | benign | 0.449 | Stabilizing | 0.329 | N | 0.418 | neutral | None | None | None | None | N |
H/T | 0.4032 | ambiguous | 0.2943 | benign | 0.582 | Stabilizing | 0.495 | N | 0.502 | neutral | None | None | None | None | N |
H/V | 0.4554 | ambiguous | 0.3531 | ambiguous | 0.878 | Stabilizing | 0.176 | N | 0.474 | neutral | None | None | None | None | N |
H/W | 0.422 | ambiguous | 0.4121 | ambiguous | 1.125 | Stabilizing | 0.981 | D | 0.519 | neutral | None | None | None | None | N |
H/Y | 0.1186 | likely_benign | 0.1034 | benign | 1.367 | Stabilizing | 0.27 | N | 0.376 | neutral | N | 0.408543105 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.