Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17931 | 54016;54017;54018 | chr2:178605504;178605503;178605502 | chr2:179470231;179470230;179470229 |
N2AB | 16290 | 49093;49094;49095 | chr2:178605504;178605503;178605502 | chr2:179470231;179470230;179470229 |
N2A | 15363 | 46312;46313;46314 | chr2:178605504;178605503;178605502 | chr2:179470231;179470230;179470229 |
N2B | 8866 | 26821;26822;26823 | chr2:178605504;178605503;178605502 | chr2:179470231;179470230;179470229 |
Novex-1 | 8991 | 27196;27197;27198 | chr2:178605504;178605503;178605502 | chr2:179470231;179470230;179470229 |
Novex-2 | 9058 | 27397;27398;27399 | chr2:178605504;178605503;178605502 | chr2:179470231;179470230;179470229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs759208053 | -1.615 | 0.425 | N | 0.335 | 0.169 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.6559E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/E | rs759208053 | -1.615 | 0.425 | N | 0.335 | 0.169 | None | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 1.44949E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/E | rs759208053 | -1.615 | 0.425 | N | 0.335 | 0.169 | None | gnomAD-4.0.0 | 6.20302E-06 | None | None | None | None | N | None | 1.33711E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.286 | likely_benign | 0.2506 | benign | -0.812 | Destabilizing | 0.495 | N | 0.362 | neutral | None | None | None | None | N |
Q/C | 0.5357 | ambiguous | 0.4444 | ambiguous | -0.187 | Destabilizing | 0.995 | D | 0.475 | neutral | None | None | None | None | N |
Q/D | 0.5172 | ambiguous | 0.4377 | ambiguous | -1.304 | Destabilizing | 0.704 | D | 0.297 | neutral | None | None | None | None | N |
Q/E | 0.1101 | likely_benign | 0.1067 | benign | -1.091 | Destabilizing | 0.425 | N | 0.335 | neutral | N | 0.432265327 | None | None | N |
Q/F | 0.6348 | likely_pathogenic | 0.5617 | ambiguous | -0.185 | Destabilizing | 0.893 | D | 0.526 | neutral | None | None | None | None | N |
Q/G | 0.4041 | ambiguous | 0.3393 | benign | -1.263 | Destabilizing | 0.704 | D | 0.39 | neutral | None | None | None | None | N |
Q/H | 0.2067 | likely_benign | 0.1433 | benign | -0.97 | Destabilizing | 0.002 | N | 0.069 | neutral | N | 0.427648941 | None | None | N |
Q/I | 0.5247 | ambiguous | 0.5178 | ambiguous | 0.402 | Stabilizing | 0.944 | D | 0.529 | neutral | None | None | None | None | N |
Q/K | 0.1733 | likely_benign | 0.1516 | benign | -0.64 | Destabilizing | 0.642 | D | 0.297 | neutral | N | 0.435324274 | None | None | N |
Q/L | 0.1953 | likely_benign | 0.1809 | benign | 0.402 | Stabilizing | 0.642 | D | 0.375 | neutral | N | 0.449293649 | None | None | N |
Q/M | 0.3695 | ambiguous | 0.358 | ambiguous | 0.738 | Stabilizing | 0.981 | D | 0.39 | neutral | None | None | None | None | N |
Q/N | 0.3273 | likely_benign | 0.2572 | benign | -1.385 | Destabilizing | 0.704 | D | 0.294 | neutral | None | None | None | None | N |
Q/P | 0.8863 | likely_pathogenic | 0.8876 | pathogenic | 0.027 | Stabilizing | 0.975 | D | 0.456 | neutral | N | 0.471875764 | None | None | N |
Q/R | 0.169 | likely_benign | 0.1481 | benign | -0.743 | Destabilizing | 0.642 | D | 0.324 | neutral | N | 0.435265559 | None | None | N |
Q/S | 0.3025 | likely_benign | 0.2389 | benign | -1.529 | Destabilizing | 0.704 | D | 0.266 | neutral | None | None | None | None | N |
Q/T | 0.2942 | likely_benign | 0.2613 | benign | -1.117 | Destabilizing | 0.828 | D | 0.394 | neutral | None | None | None | None | N |
Q/V | 0.3224 | likely_benign | 0.3199 | benign | 0.027 | Stabilizing | 0.828 | D | 0.481 | neutral | None | None | None | None | N |
Q/W | 0.6335 | likely_pathogenic | 0.5844 | pathogenic | -0.198 | Destabilizing | 0.003 | N | 0.167 | neutral | None | None | None | None | N |
Q/Y | 0.4461 | ambiguous | 0.361 | ambiguous | 0.102 | Stabilizing | 0.704 | D | 0.39 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.