Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17937 | 54034;54035;54036 | chr2:178605486;178605485;178605484 | chr2:179470213;179470212;179470211 |
N2AB | 16296 | 49111;49112;49113 | chr2:178605486;178605485;178605484 | chr2:179470213;179470212;179470211 |
N2A | 15369 | 46330;46331;46332 | chr2:178605486;178605485;178605484 | chr2:179470213;179470212;179470211 |
N2B | 8872 | 26839;26840;26841 | chr2:178605486;178605485;178605484 | chr2:179470213;179470212;179470211 |
Novex-1 | 8997 | 27214;27215;27216 | chr2:178605486;178605485;178605484 | chr2:179470213;179470212;179470211 |
Novex-2 | 9064 | 27415;27416;27417 | chr2:178605486;178605485;178605484 | chr2:179470213;179470212;179470211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs1559723150 | None | 0.966 | D | 0.839 | 0.761 | 0.901659094074 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66611E-04 |
V/D | rs1559723150 | None | 0.966 | D | 0.839 | 0.761 | 0.901659094074 | gnomAD-4.0.0 | 1.59467E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03232E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6812 | likely_pathogenic | 0.7126 | pathogenic | -2.54 | Highly Destabilizing | 0.005 | N | 0.307 | neutral | N | 0.517916773 | None | None | N |
V/C | 0.9066 | likely_pathogenic | 0.9116 | pathogenic | -1.995 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
V/D | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | -3.543 | Highly Destabilizing | 0.966 | D | 0.839 | deleterious | D | 0.620429244 | None | None | N |
V/E | 0.9935 | likely_pathogenic | 0.9948 | pathogenic | -3.245 | Highly Destabilizing | 0.949 | D | 0.757 | deleterious | None | None | None | None | N |
V/F | 0.9462 | likely_pathogenic | 0.955 | pathogenic | -1.464 | Destabilizing | 0.966 | D | 0.685 | prob.neutral | D | 0.5612024 | None | None | N |
V/G | 0.8618 | likely_pathogenic | 0.8886 | pathogenic | -3.104 | Highly Destabilizing | 0.669 | D | 0.763 | deleterious | D | 0.620429244 | None | None | N |
V/H | 0.9986 | likely_pathogenic | 0.999 | pathogenic | -2.98 | Highly Destabilizing | 0.998 | D | 0.868 | deleterious | None | None | None | None | N |
V/I | 0.1484 | likely_benign | 0.1536 | benign | -0.895 | Destabilizing | 0.022 | N | 0.182 | neutral | N | 0.507262596 | None | None | N |
V/K | 0.9963 | likely_pathogenic | 0.9972 | pathogenic | -2.14 | Highly Destabilizing | 0.949 | D | 0.763 | deleterious | None | None | None | None | N |
V/L | 0.7457 | likely_pathogenic | 0.7732 | pathogenic | -0.895 | Destabilizing | 0.454 | N | 0.341 | neutral | N | 0.498225447 | None | None | N |
V/M | 0.8363 | likely_pathogenic | 0.8653 | pathogenic | -1.149 | Destabilizing | 0.974 | D | 0.609 | neutral | None | None | None | None | N |
V/N | 0.9914 | likely_pathogenic | 0.9929 | pathogenic | -2.772 | Highly Destabilizing | 0.974 | D | 0.853 | deleterious | None | None | None | None | N |
V/P | 0.9939 | likely_pathogenic | 0.9922 | pathogenic | -1.427 | Destabilizing | 0.974 | D | 0.809 | deleterious | None | None | None | None | N |
V/Q | 0.9923 | likely_pathogenic | 0.9939 | pathogenic | -2.449 | Highly Destabilizing | 0.974 | D | 0.83 | deleterious | None | None | None | None | N |
V/R | 0.9907 | likely_pathogenic | 0.9927 | pathogenic | -2.118 | Highly Destabilizing | 0.974 | D | 0.849 | deleterious | None | None | None | None | N |
V/S | 0.9351 | likely_pathogenic | 0.947 | pathogenic | -3.243 | Highly Destabilizing | 0.728 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/T | 0.8733 | likely_pathogenic | 0.9069 | pathogenic | -2.806 | Highly Destabilizing | 0.842 | D | 0.547 | neutral | None | None | None | None | N |
V/W | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -2.069 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9943 | likely_pathogenic | 0.9954 | pathogenic | -1.785 | Destabilizing | 0.991 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.