Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1794 | 5605;5606;5607 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
N2AB | 1794 | 5605;5606;5607 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
N2A | 1794 | 5605;5606;5607 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
N2B | 1748 | 5467;5468;5469 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
Novex-1 | 1748 | 5467;5468;5469 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
Novex-2 | 1748 | 5467;5468;5469 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
Novex-3 | 1794 | 5605;5606;5607 | chr2:178776484;178776483;178776482 | chr2:179641211;179641210;179641209 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs774766261 | -1.707 | 0.999 | D | 0.784 | 0.714 | 0.802620329787 | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | N | None | 0 | 0 | None | 9.93E-05 | 0 | None | 0 | None | 0 | 1.77E-05 | 1.64258E-04 |
V/A | rs774766261 | -1.707 | 0.999 | D | 0.784 | 0.714 | 0.802620329787 | gnomAD-4.0.0 | 1.12418E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41196E-04 | 1.42837E-05 | 0 | 3.02499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9246 | likely_pathogenic | 0.8769 | pathogenic | -1.778 | Destabilizing | 0.999 | D | 0.784 | deleterious | D | 0.808561471 | None | None | N |
V/C | 0.9758 | likely_pathogenic | 0.9646 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.9985 | pathogenic | -2.163 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.807803822 | None | None | N |
V/E | 0.9959 | likely_pathogenic | 0.9938 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
V/F | 0.9592 | likely_pathogenic | 0.8806 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.808561471 | None | None | N |
V/G | 0.9686 | likely_pathogenic | 0.9498 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.807803822 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9974 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/I | 0.1552 | likely_benign | 0.1339 | benign | -0.903 | Destabilizing | 0.997 | D | 0.749 | deleterious | D | 0.648475588 | None | None | N |
V/K | 0.9979 | likely_pathogenic | 0.9955 | pathogenic | -1.373 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
V/L | 0.8359 | likely_pathogenic | 0.6718 | pathogenic | -0.903 | Destabilizing | 0.997 | D | 0.792 | deleterious | D | 0.718613711 | None | None | N |
V/M | 0.8878 | likely_pathogenic | 0.7844 | pathogenic | -1.083 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/N | 0.9951 | likely_pathogenic | 0.9922 | pathogenic | -1.431 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
V/P | 0.995 | likely_pathogenic | 0.9921 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
V/Q | 0.9952 | likely_pathogenic | 0.9902 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
V/R | 0.9948 | likely_pathogenic | 0.9894 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
V/S | 0.9682 | likely_pathogenic | 0.9575 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/T | 0.9156 | likely_pathogenic | 0.8971 | pathogenic | -1.817 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.998 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/Y | 0.9974 | likely_pathogenic | 0.9928 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.