Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17940 | 54043;54044;54045 | chr2:178605477;178605476;178605475 | chr2:179470204;179470203;179470202 |
N2AB | 16299 | 49120;49121;49122 | chr2:178605477;178605476;178605475 | chr2:179470204;179470203;179470202 |
N2A | 15372 | 46339;46340;46341 | chr2:178605477;178605476;178605475 | chr2:179470204;179470203;179470202 |
N2B | 8875 | 26848;26849;26850 | chr2:178605477;178605476;178605475 | chr2:179470204;179470203;179470202 |
Novex-1 | 9000 | 27223;27224;27225 | chr2:178605477;178605476;178605475 | chr2:179470204;179470203;179470202 |
Novex-2 | 9067 | 27424;27425;27426 | chr2:178605477;178605476;178605475 | chr2:179470204;179470203;179470202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.116 | N | 0.181 | 0.214 | 0.477606743035 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
V/I | None | None | 0.828 | N | 0.543 | 0.133 | 0.482936932564 | gnomAD-4.0.0 | 1.59576E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86664E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4 | ambiguous | 0.3567 | ambiguous | -2.051 | Highly Destabilizing | 0.116 | N | 0.181 | neutral | N | 0.508520885 | None | None | N |
V/C | 0.7414 | likely_pathogenic | 0.6978 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
V/D | 0.9051 | likely_pathogenic | 0.873 | pathogenic | -2.379 | Highly Destabilizing | 0.994 | D | 0.751 | deleterious | N | 0.504968218 | None | None | N |
V/E | 0.5885 | likely_pathogenic | 0.5526 | ambiguous | -2.253 | Highly Destabilizing | 0.995 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/F | 0.2526 | likely_benign | 0.2555 | benign | -1.339 | Destabilizing | 0.988 | D | 0.703 | prob.neutral | N | 0.47901315 | None | None | N |
V/G | 0.7025 | likely_pathogenic | 0.6165 | pathogenic | -2.494 | Highly Destabilizing | 0.959 | D | 0.71 | prob.delet. | N | 0.501093878 | None | None | N |
V/H | 0.8012 | likely_pathogenic | 0.7622 | pathogenic | -1.974 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/I | 0.073 | likely_benign | 0.0782 | benign | -0.859 | Destabilizing | 0.828 | D | 0.543 | neutral | N | 0.488510972 | None | None | N |
V/K | 0.5616 | ambiguous | 0.4724 | ambiguous | -1.602 | Destabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/L | 0.3139 | likely_benign | 0.3064 | benign | -0.859 | Destabilizing | 0.03 | N | 0.169 | neutral | N | 0.47918728 | None | None | N |
V/M | 0.1898 | likely_benign | 0.1803 | benign | -0.96 | Destabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | N |
V/N | 0.768 | likely_pathogenic | 0.7137 | pathogenic | -1.721 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
V/P | 0.9931 | likely_pathogenic | 0.9864 | pathogenic | -1.227 | Destabilizing | 0.995 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/Q | 0.49 | ambiguous | 0.4314 | ambiguous | -1.747 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/R | 0.5168 | ambiguous | 0.4331 | ambiguous | -1.231 | Destabilizing | 0.995 | D | 0.752 | deleterious | None | None | None | None | N |
V/S | 0.5799 | likely_pathogenic | 0.5112 | ambiguous | -2.359 | Highly Destabilizing | 0.939 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/T | 0.3652 | ambiguous | 0.3235 | benign | -2.106 | Highly Destabilizing | 0.969 | D | 0.595 | neutral | None | None | None | None | N |
V/W | 0.8908 | likely_pathogenic | 0.8673 | pathogenic | -1.661 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
V/Y | 0.7032 | likely_pathogenic | 0.6728 | pathogenic | -1.347 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.