Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17945 | 54058;54059;54060 | chr2:178605462;178605461;178605460 | chr2:179470189;179470188;179470187 |
N2AB | 16304 | 49135;49136;49137 | chr2:178605462;178605461;178605460 | chr2:179470189;179470188;179470187 |
N2A | 15377 | 46354;46355;46356 | chr2:178605462;178605461;178605460 | chr2:179470189;179470188;179470187 |
N2B | 8880 | 26863;26864;26865 | chr2:178605462;178605461;178605460 | chr2:179470189;179470188;179470187 |
Novex-1 | 9005 | 27238;27239;27240 | chr2:178605462;178605461;178605460 | chr2:179470189;179470188;179470187 |
Novex-2 | 9072 | 27439;27440;27441 | chr2:178605462;178605461;178605460 | chr2:179470189;179470188;179470187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs556413709 | -0.411 | 0.996 | N | 0.606 | 0.135 | 0.240491677333 | gnomAD-2.1.1 | 2.83E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.93479E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs556413709 | -0.411 | 0.996 | N | 0.606 | 0.135 | 0.240491677333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.94932E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs556413709 | -0.411 | 0.996 | N | 0.606 | 0.135 | 0.240491677333 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/D | rs556413709 | -0.411 | 0.996 | N | 0.606 | 0.135 | 0.240491677333 | gnomAD-4.0.0 | 4.34399E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.56754E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1745 | likely_benign | 0.1683 | benign | -0.621 | Destabilizing | 0.996 | D | 0.704 | prob.neutral | N | 0.479747055 | None | None | I |
E/C | 0.8366 | likely_pathogenic | 0.8168 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/D | 0.1961 | likely_benign | 0.2073 | benign | -0.623 | Destabilizing | 0.996 | D | 0.606 | neutral | N | 0.483056719 | None | None | I |
E/F | 0.7069 | likely_pathogenic | 0.6922 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
E/G | 0.3558 | ambiguous | 0.3075 | benign | -0.889 | Destabilizing | 0.999 | D | 0.754 | deleterious | N | 0.473010945 | None | None | I |
E/H | 0.6316 | likely_pathogenic | 0.5855 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
E/I | 0.255 | likely_benign | 0.2524 | benign | 0.079 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
E/K | 0.3231 | likely_benign | 0.2458 | benign | 0.172 | Stabilizing | 0.992 | D | 0.706 | prob.neutral | N | 0.465452393 | None | None | I |
E/L | 0.3781 | ambiguous | 0.3515 | ambiguous | 0.079 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
E/M | 0.4339 | ambiguous | 0.4071 | ambiguous | 0.31 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
E/N | 0.3868 | ambiguous | 0.3659 | ambiguous | -0.376 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/P | 0.4213 | ambiguous | 0.4247 | ambiguous | -0.133 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
E/Q | 0.2219 | likely_benign | 0.1888 | benign | -0.3 | Destabilizing | 0.957 | D | 0.327 | neutral | N | 0.472994441 | None | None | I |
E/R | 0.4863 | ambiguous | 0.4069 | ambiguous | 0.435 | Stabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | I |
E/S | 0.2831 | likely_benign | 0.2602 | benign | -0.55 | Destabilizing | 0.997 | D | 0.743 | deleterious | None | None | None | None | I |
E/T | 0.2596 | likely_benign | 0.2383 | benign | -0.317 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
E/V | 0.1625 | likely_benign | 0.1609 | benign | -0.133 | Destabilizing | 0.999 | D | 0.807 | deleterious | N | 0.456600837 | None | None | I |
E/W | 0.9226 | likely_pathogenic | 0.9141 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
E/Y | 0.6698 | likely_pathogenic | 0.6459 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.