Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17947 | 54064;54065;54066 | chr2:178605456;178605455;178605454 | chr2:179470183;179470182;179470181 |
N2AB | 16306 | 49141;49142;49143 | chr2:178605456;178605455;178605454 | chr2:179470183;179470182;179470181 |
N2A | 15379 | 46360;46361;46362 | chr2:178605456;178605455;178605454 | chr2:179470183;179470182;179470181 |
N2B | 8882 | 26869;26870;26871 | chr2:178605456;178605455;178605454 | chr2:179470183;179470182;179470181 |
Novex-1 | 9007 | 27244;27245;27246 | chr2:178605456;178605455;178605454 | chr2:179470183;179470182;179470181 |
Novex-2 | 9074 | 27445;27446;27447 | chr2:178605456;178605455;178605454 | chr2:179470183;179470182;179470181 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1445321949 | 0.848 | 0.928 | N | 0.649 | 0.277 | 0.264547087235 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
E/K | rs1445321949 | 0.848 | 0.928 | N | 0.649 | 0.277 | 0.264547087235 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1445321949 | 0.848 | 0.928 | N | 0.649 | 0.277 | 0.264547087235 | gnomAD-4.0.0 | 1.98681E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.63147E-05 | 0 | 1.60457E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2206 | likely_benign | 0.1891 | benign | -0.351 | Destabilizing | 0.928 | D | 0.663 | neutral | N | 0.509534032 | None | None | I |
E/C | 0.8947 | likely_pathogenic | 0.8771 | pathogenic | 0.091 | Stabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
E/D | 0.0969 | likely_benign | 0.0918 | benign | -0.294 | Destabilizing | 0.039 | N | 0.275 | neutral | N | 0.497028881 | None | None | I |
E/F | 0.8095 | likely_pathogenic | 0.7603 | pathogenic | -0.345 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/G | 0.3162 | likely_benign | 0.2616 | benign | -0.519 | Destabilizing | 0.978 | D | 0.676 | prob.neutral | N | 0.478926428 | None | None | I |
E/H | 0.6095 | likely_pathogenic | 0.5511 | ambiguous | -0.115 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/I | 0.4011 | ambiguous | 0.368 | ambiguous | 0.05 | Stabilizing | 0.992 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/K | 0.2759 | likely_benign | 0.2219 | benign | 0.45 | Stabilizing | 0.928 | D | 0.649 | neutral | N | 0.514825208 | None | None | I |
E/L | 0.4367 | ambiguous | 0.3838 | ambiguous | 0.05 | Stabilizing | 0.992 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/M | 0.5488 | ambiguous | 0.4969 | ambiguous | 0.209 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/N | 0.3112 | likely_benign | 0.2687 | benign | 0.169 | Stabilizing | 0.968 | D | 0.743 | deleterious | None | None | None | None | I |
E/P | 0.4795 | ambiguous | 0.4172 | ambiguous | -0.064 | Destabilizing | 0.992 | D | 0.745 | deleterious | None | None | None | None | I |
E/Q | 0.2133 | likely_benign | 0.188 | benign | 0.19 | Stabilizing | 0.978 | D | 0.73 | prob.delet. | N | 0.512670337 | None | None | I |
E/R | 0.4445 | ambiguous | 0.3758 | ambiguous | 0.568 | Stabilizing | 0.992 | D | 0.762 | deleterious | None | None | None | None | I |
E/S | 0.2714 | likely_benign | 0.2327 | benign | 0.026 | Stabilizing | 0.944 | D | 0.67 | neutral | None | None | None | None | I |
E/T | 0.3113 | likely_benign | 0.2778 | benign | 0.168 | Stabilizing | 0.983 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/V | 0.2684 | likely_benign | 0.2427 | benign | -0.064 | Destabilizing | 0.989 | D | 0.742 | deleterious | N | 0.474864731 | None | None | I |
E/W | 0.9419 | likely_pathogenic | 0.9252 | pathogenic | -0.225 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | I |
E/Y | 0.6943 | likely_pathogenic | 0.627 | pathogenic | -0.104 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.