Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17950 | 54073;54074;54075 | chr2:178605447;178605446;178605445 | chr2:179470174;179470173;179470172 |
N2AB | 16309 | 49150;49151;49152 | chr2:178605447;178605446;178605445 | chr2:179470174;179470173;179470172 |
N2A | 15382 | 46369;46370;46371 | chr2:178605447;178605446;178605445 | chr2:179470174;179470173;179470172 |
N2B | 8885 | 26878;26879;26880 | chr2:178605447;178605446;178605445 | chr2:179470174;179470173;179470172 |
Novex-1 | 9010 | 27253;27254;27255 | chr2:178605447;178605446;178605445 | chr2:179470174;179470173;179470172 |
Novex-2 | 9077 | 27454;27455;27456 | chr2:178605447;178605446;178605445 | chr2:179470174;179470173;179470172 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs2054558907 | None | 0.988 | N | 0.815 | 0.337 | 0.602722737475 | gnomAD-4.0.0 | 1.60013E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87527E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4215 | ambiguous | 0.3983 | ambiguous | -0.438 | Destabilizing | 0.168 | N | 0.441 | neutral | None | None | None | None | I |
L/C | 0.7856 | likely_pathogenic | 0.751 | pathogenic | -0.7 | Destabilizing | 0.999 | D | 0.658 | prob.neutral | None | None | None | None | I |
L/D | 0.8528 | likely_pathogenic | 0.823 | pathogenic | -0.12 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | I |
L/E | 0.602 | likely_pathogenic | 0.5775 | pathogenic | -0.22 | Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | I |
L/F | 0.277 | likely_benign | 0.2411 | benign | -0.589 | Destabilizing | 0.991 | D | 0.598 | neutral | None | None | None | None | I |
L/G | 0.7525 | likely_pathogenic | 0.7385 | pathogenic | -0.549 | Destabilizing | 0.981 | D | 0.572 | neutral | None | None | None | None | I |
L/H | 0.4759 | ambiguous | 0.4438 | ambiguous | 0.081 | Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
L/I | 0.1247 | likely_benign | 0.1186 | benign | -0.272 | Destabilizing | 0.132 | N | 0.181 | neutral | N | 0.419333315 | None | None | I |
L/K | 0.4561 | ambiguous | 0.4531 | ambiguous | -0.259 | Destabilizing | 0.991 | D | 0.73 | deleterious | None | None | None | None | I |
L/M | 0.1611 | likely_benign | 0.1574 | benign | -0.472 | Destabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | I |
L/N | 0.5358 | ambiguous | 0.5007 | ambiguous | -0.089 | Destabilizing | 0.997 | D | 0.813 | deleterious | None | None | None | None | I |
L/P | 0.5385 | ambiguous | 0.5144 | ambiguous | -0.297 | Destabilizing | 0.988 | D | 0.804 | deleterious | N | 0.403958431 | None | None | I |
L/Q | 0.299 | likely_benign | 0.2998 | benign | -0.288 | Destabilizing | 0.996 | D | 0.818 | deleterious | N | 0.42683529 | None | None | I |
L/R | 0.4324 | ambiguous | 0.4156 | ambiguous | 0.222 | Stabilizing | 0.988 | D | 0.815 | deleterious | N | 0.449616149 | None | None | I |
L/S | 0.5118 | ambiguous | 0.4852 | ambiguous | -0.496 | Destabilizing | 0.883 | D | 0.598 | neutral | None | None | None | None | I |
L/T | 0.4239 | ambiguous | 0.4055 | ambiguous | -0.491 | Destabilizing | 0.938 | D | 0.628 | neutral | None | None | None | None | I |
L/V | 0.15 | likely_benign | 0.1439 | benign | -0.297 | Destabilizing | 0.702 | D | 0.586 | neutral | N | 0.435590846 | None | None | I |
L/W | 0.5471 | ambiguous | 0.5026 | ambiguous | -0.605 | Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | I |
L/Y | 0.5369 | ambiguous | 0.4986 | ambiguous | -0.356 | Destabilizing | 0.997 | D | 0.633 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.