Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17956 | 54091;54092;54093 | chr2:178605429;178605428;178605427 | chr2:179470156;179470155;179470154 |
N2AB | 16315 | 49168;49169;49170 | chr2:178605429;178605428;178605427 | chr2:179470156;179470155;179470154 |
N2A | 15388 | 46387;46388;46389 | chr2:178605429;178605428;178605427 | chr2:179470156;179470155;179470154 |
N2B | 8891 | 26896;26897;26898 | chr2:178605429;178605428;178605427 | chr2:179470156;179470155;179470154 |
Novex-1 | 9016 | 27271;27272;27273 | chr2:178605429;178605428;178605427 | chr2:179470156;179470155;179470154 |
Novex-2 | 9083 | 27472;27473;27474 | chr2:178605429;178605428;178605427 | chr2:179470156;179470155;179470154 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.188 | N | 0.215 | 0.119 | 0.415055319159 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9641 | likely_pathogenic | 0.9561 | pathogenic | -3.292 | Highly Destabilizing | 0.982 | D | 0.498 | neutral | None | None | None | None | N |
I/C | 0.9719 | likely_pathogenic | 0.9593 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.695 | prob.delet. | None | None | None | None | N |
I/D | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -3.442 | Highly Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
I/E | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -3.175 | Highly Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
I/F | 0.9281 | likely_pathogenic | 0.8993 | pathogenic | -1.664 | Destabilizing | 0.997 | D | 0.641 | neutral | None | None | None | None | N |
I/G | 0.9974 | likely_pathogenic | 0.9968 | pathogenic | -3.775 | Highly Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
I/H | 0.9989 | likely_pathogenic | 0.9983 | pathogenic | -2.976 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
I/K | 0.998 | likely_pathogenic | 0.9975 | pathogenic | -2.28 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | N | 0.4654893 | None | None | N |
I/L | 0.5445 | ambiguous | 0.4893 | ambiguous | -1.82 | Destabilizing | 0.787 | D | 0.447 | neutral | N | 0.493887002 | None | None | N |
I/M | 0.6435 | likely_pathogenic | 0.5925 | pathogenic | -2.132 | Highly Destabilizing | 0.997 | D | 0.655 | prob.neutral | N | 0.488539897 | None | None | N |
I/N | 0.9916 | likely_pathogenic | 0.9869 | pathogenic | -2.791 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
I/P | 0.9897 | likely_pathogenic | 0.9812 | pathogenic | -2.306 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
I/Q | 0.9975 | likely_pathogenic | 0.9965 | pathogenic | -2.524 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
I/R | 0.9966 | likely_pathogenic | 0.9955 | pathogenic | -2.126 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.46574279 | None | None | N |
I/S | 0.9837 | likely_pathogenic | 0.9781 | pathogenic | -3.324 | Highly Destabilizing | 0.997 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/T | 0.9698 | likely_pathogenic | 0.9605 | pathogenic | -2.932 | Highly Destabilizing | 0.976 | D | 0.613 | neutral | N | 0.507941229 | None | None | N |
I/V | 0.2439 | likely_benign | 0.2385 | benign | -2.306 | Highly Destabilizing | 0.188 | N | 0.215 | neutral | N | 0.441092667 | None | None | N |
I/W | 0.9987 | likely_pathogenic | 0.9981 | pathogenic | -1.867 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
I/Y | 0.9958 | likely_pathogenic | 0.994 | pathogenic | -1.907 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.