Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17969 | 54130;54131;54132 | chr2:178605272;178605271;178605270 | chr2:179469999;179469998;179469997 |
N2AB | 16328 | 49207;49208;49209 | chr2:178605272;178605271;178605270 | chr2:179469999;179469998;179469997 |
N2A | 15401 | 46426;46427;46428 | chr2:178605272;178605271;178605270 | chr2:179469999;179469998;179469997 |
N2B | 8904 | 26935;26936;26937 | chr2:178605272;178605271;178605270 | chr2:179469999;179469998;179469997 |
Novex-1 | 9029 | 27310;27311;27312 | chr2:178605272;178605271;178605270 | chr2:179469999;179469998;179469997 |
Novex-2 | 9096 | 27511;27512;27513 | chr2:178605272;178605271;178605270 | chr2:179469999;179469998;179469997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs780364455 | -0.436 | 0.998 | N | 0.601 | 0.551 | 0.73779808135 | gnomAD-2.1.1 | 4.34E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.69E-05 | None | 0 | 0 | 0 |
L/P | rs780364455 | -0.436 | 0.998 | N | 0.601 | 0.551 | 0.73779808135 | gnomAD-4.0.0 | 1.64259E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4993E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6595 | likely_pathogenic | 0.5247 | ambiguous | -0.787 | Destabilizing | 0.97 | D | 0.528 | neutral | None | None | None | None | I |
L/C | 0.8211 | likely_pathogenic | 0.7723 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | I |
L/D | 0.9324 | likely_pathogenic | 0.885 | pathogenic | 0.156 | Stabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | I |
L/E | 0.7771 | likely_pathogenic | 0.6706 | pathogenic | 0.131 | Stabilizing | 0.97 | D | 0.522 | neutral | None | None | None | None | I |
L/F | 0.307 | likely_benign | 0.2591 | benign | -0.498 | Destabilizing | 0.996 | D | 0.58 | neutral | None | None | None | None | I |
L/G | 0.8336 | likely_pathogenic | 0.7395 | pathogenic | -1.016 | Destabilizing | 0.996 | D | 0.551 | neutral | None | None | None | None | I |
L/H | 0.6811 | likely_pathogenic | 0.5644 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
L/I | 0.1854 | likely_benign | 0.1609 | benign | -0.274 | Destabilizing | 0.304 | N | 0.185 | neutral | None | None | None | None | I |
L/K | 0.6262 | likely_pathogenic | 0.5477 | ambiguous | -0.51 | Destabilizing | 0.304 | N | 0.282 | neutral | None | None | None | None | I |
L/M | 0.1884 | likely_benign | 0.1654 | benign | -0.55 | Destabilizing | 0.994 | D | 0.576 | neutral | N | 0.445781702 | None | None | I |
L/N | 0.7677 | likely_pathogenic | 0.6466 | pathogenic | -0.435 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | I |
L/P | 0.6139 | likely_pathogenic | 0.4616 | ambiguous | -0.413 | Destabilizing | 0.998 | D | 0.601 | neutral | N | 0.464636822 | None | None | I |
L/Q | 0.5443 | ambiguous | 0.4122 | ambiguous | -0.51 | Destabilizing | 0.989 | D | 0.594 | neutral | N | 0.464463464 | None | None | I |
L/R | 0.6016 | likely_pathogenic | 0.5183 | ambiguous | -0.118 | Destabilizing | 0.977 | D | 0.511 | neutral | N | 0.464463464 | None | None | I |
L/S | 0.7943 | likely_pathogenic | 0.652 | pathogenic | -1.007 | Destabilizing | 0.97 | D | 0.494 | neutral | None | None | None | None | I |
L/T | 0.5893 | likely_pathogenic | 0.4626 | ambiguous | -0.906 | Destabilizing | 0.985 | D | 0.543 | neutral | None | None | None | None | I |
L/V | 0.187 | likely_benign | 0.1537 | benign | -0.413 | Destabilizing | 0.835 | D | 0.473 | neutral | N | 0.424422208 | None | None | I |
L/W | 0.6399 | likely_pathogenic | 0.5782 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
L/Y | 0.6754 | likely_pathogenic | 0.5948 | pathogenic | -0.302 | Destabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.