Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17973 | 54142;54143;54144 | chr2:178605260;178605259;178605258 | chr2:179469987;179469986;179469985 |
N2AB | 16332 | 49219;49220;49221 | chr2:178605260;178605259;178605258 | chr2:179469987;179469986;179469985 |
N2A | 15405 | 46438;46439;46440 | chr2:178605260;178605259;178605258 | chr2:179469987;179469986;179469985 |
N2B | 8908 | 26947;26948;26949 | chr2:178605260;178605259;178605258 | chr2:179469987;179469986;179469985 |
Novex-1 | 9033 | 27322;27323;27324 | chr2:178605260;178605259;178605258 | chr2:179469987;179469986;179469985 |
Novex-2 | 9100 | 27523;27524;27525 | chr2:178605260;178605259;178605258 | chr2:179469987;179469986;179469985 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs2054500597 | None | 0.974 | N | 0.559 | 0.252 | 0.27855597813 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/A | rs2054500597 | None | 0.974 | N | 0.559 | 0.252 | 0.27855597813 | gnomAD-4.0.0 | 2.03049E-06 | None | None | None | None | N | None | 3.49883E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.25 | likely_benign | 0.2793 | benign | -0.22 | Destabilizing | 0.974 | D | 0.559 | neutral | N | 0.497439887 | None | None | N |
G/C | 0.6025 | likely_pathogenic | 0.6231 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
G/D | 0.6253 | likely_pathogenic | 0.6277 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
G/E | 0.6085 | likely_pathogenic | 0.6145 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.496226378 | None | None | N |
G/F | 0.8776 | likely_pathogenic | 0.8908 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
G/H | 0.7915 | likely_pathogenic | 0.8166 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
G/I | 0.7331 | likely_pathogenic | 0.768 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
G/K | 0.7956 | likely_pathogenic | 0.8362 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/L | 0.7735 | likely_pathogenic | 0.8032 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
G/M | 0.7703 | likely_pathogenic | 0.8023 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
G/N | 0.543 | ambiguous | 0.581 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
G/P | 0.9327 | likely_pathogenic | 0.9464 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
G/Q | 0.6817 | likely_pathogenic | 0.7121 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/R | 0.7393 | likely_pathogenic | 0.7718 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.876 | deleterious | N | 0.484977859 | None | None | N |
G/S | 0.1893 | likely_benign | 0.208 | benign | -0.604 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
G/T | 0.3603 | ambiguous | 0.4106 | ambiguous | -0.676 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
G/V | 0.5602 | ambiguous | 0.6058 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.52810951 | None | None | N |
G/W | 0.7735 | likely_pathogenic | 0.7868 | pathogenic | -1.064 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
G/Y | 0.8034 | likely_pathogenic | 0.8275 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.