Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17982 | 54169;54170;54171 | chr2:178605233;178605232;178605231 | chr2:179469960;179469959;179469958 |
N2AB | 16341 | 49246;49247;49248 | chr2:178605233;178605232;178605231 | chr2:179469960;179469959;179469958 |
N2A | 15414 | 46465;46466;46467 | chr2:178605233;178605232;178605231 | chr2:179469960;179469959;179469958 |
N2B | 8917 | 26974;26975;26976 | chr2:178605233;178605232;178605231 | chr2:179469960;179469959;179469958 |
Novex-1 | 9042 | 27349;27350;27351 | chr2:178605233;178605232;178605231 | chr2:179469960;179469959;179469958 |
Novex-2 | 9109 | 27550;27551;27552 | chr2:178605233;178605232;178605231 | chr2:179469960;179469959;179469958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1270287250 | 0.114 | 0.885 | N | 0.381 | 0.198 | 0.260735089382 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.1489E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1270287250 | 0.114 | 0.885 | N | 0.381 | 0.198 | 0.260735089382 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1270287250 | 0.114 | 0.885 | N | 0.381 | 0.198 | 0.260735089382 | gnomAD-4.0.0 | 3.04585E-06 | None | None | None | None | N | None | 3.49846E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2051E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2809 | likely_benign | 0.2944 | benign | -0.646 | Destabilizing | 0.939 | D | 0.379 | neutral | N | 0.472431507 | None | None | N |
E/C | 0.9009 | likely_pathogenic | 0.8997 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/D | 0.1402 | likely_benign | 0.1344 | benign | -0.654 | Destabilizing | 0.02 | N | 0.181 | neutral | N | 0.450341294 | None | None | N |
E/F | 0.8437 | likely_pathogenic | 0.8307 | pathogenic | -0.369 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
E/G | 0.3877 | ambiguous | 0.3871 | ambiguous | -0.908 | Destabilizing | 0.939 | D | 0.435 | neutral | N | 0.477855969 | None | None | N |
E/H | 0.6808 | likely_pathogenic | 0.6561 | pathogenic | -0.359 | Destabilizing | 0.998 | D | 0.361 | neutral | None | None | None | None | N |
E/I | 0.5398 | ambiguous | 0.5626 | ambiguous | 0.036 | Stabilizing | 0.993 | D | 0.625 | neutral | None | None | None | None | N |
E/K | 0.3632 | ambiguous | 0.3578 | ambiguous | -0.11 | Destabilizing | 0.885 | D | 0.381 | neutral | N | 0.487187529 | None | None | N |
E/L | 0.5788 | likely_pathogenic | 0.5987 | pathogenic | 0.036 | Stabilizing | 0.986 | D | 0.588 | neutral | None | None | None | None | N |
E/M | 0.5291 | ambiguous | 0.5393 | ambiguous | 0.258 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
E/N | 0.3173 | likely_benign | 0.3259 | benign | -0.487 | Destabilizing | 0.986 | D | 0.349 | neutral | None | None | None | None | N |
E/P | 0.9895 | likely_pathogenic | 0.9892 | pathogenic | -0.17 | Destabilizing | 0.993 | D | 0.435 | neutral | None | None | None | None | N |
E/Q | 0.2083 | likely_benign | 0.2106 | benign | -0.423 | Destabilizing | 0.322 | N | 0.257 | neutral | N | 0.461078363 | None | None | N |
E/R | 0.6099 | likely_pathogenic | 0.5861 | pathogenic | 0.145 | Stabilizing | 0.973 | D | 0.374 | neutral | None | None | None | None | N |
E/S | 0.2775 | likely_benign | 0.2842 | benign | -0.683 | Destabilizing | 0.953 | D | 0.343 | neutral | None | None | None | None | N |
E/T | 0.3166 | likely_benign | 0.3357 | benign | -0.473 | Destabilizing | 0.986 | D | 0.371 | neutral | None | None | None | None | N |
E/V | 0.3625 | ambiguous | 0.3832 | ambiguous | -0.17 | Destabilizing | 0.991 | D | 0.519 | neutral | N | 0.461344562 | None | None | N |
E/W | 0.9703 | likely_pathogenic | 0.9632 | pathogenic | -0.164 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Y | 0.7694 | likely_pathogenic | 0.755 | pathogenic | -0.129 | Destabilizing | 0.998 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.